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Many algorithms for processing probabilistic networks are dependent on the topological properties of the problem's structure. Such algorithms (e.g., clustering, conditioning) are effective only if the problem has a sparse graph captured by…

Artificial Intelligence · Computer Science 2013-02-18 Yousri El Fattah , Rina Dechter

We derive an efficient method to perform clustering of nodes in Gaussian graphical models directly from sample data. Nodes are clustered based on the similarity of their network neighborhoods, with edge weights defined by partial…

Machine Learning · Computer Science 2019-10-08 Keith Dillon

For each positive integer n the HOMFLY polynomial of links specializes to a one-variable polynomial that can be recovered from the representation theory of quantum sl(n). For each such n we build a doubly-graded homology theory of links…

Quantum Algebra · Mathematics 2007-05-23 Mikhail Khovanov , Lev Rozansky

We provide a complete taxonomic characterization of robust hierarchical clustering methods for directed networks following an axiomatic approach. We begin by introducing three practical properties associated with the notion of robustness in…

Machine Learning · Computer Science 2021-08-21 Gunnar Carlsson , Facundo Mémoli , Santiago Segarra

Different algorithms can be used for clustering purposes with data sets. On of these algorithms, uses topological features extracted from the data set to base the clusters on. The complexity of this algorithm is however exponential in the…

Quantum Physics · Physics 2019-11-26 Niels Neumann , Sterre den Breeijen

While the majority of approaches to the characterization of complex networks has relied on measurements considering only the immediate neighborhood of each network node, valuable information about the network topological properties can be…

Statistical Mechanics · Physics 2015-06-24 Luciano da Fontoura Costa , Filipi Nascimento Silva

Clustering is a well-known unsupervised machine learning approach capable of automatically grouping discrete sets of instances with similar characteristics. Constrained clustering is a semi-supervised extension to this process that can be…

Machine Learning · Computer Science 2023-03-02 Germán González-Almagro , Daniel Peralta , Eli De Poorter , José-Ramón Cano , Salvador García

Clustering large, mixed data is a central problem in data mining. Many approaches adopt the idea of k-means, and hence are sensitive to initialisation, detect only spherical clusters, and require a priori the unknown number of clusters. We…

Machine Learning · Statistics 2020-11-13 Joshua Tobin , Mimi Zhang

Clustering algorithms remain valuable tools for grouping and summarizing the most important aspects of data. Example areas where this is the case include image segmentation, dimension reduction, signals analysis, model order reduction,…

Numerical Analysis · Mathematics 2024-12-24 Guy B. Oldaker , Maria Emelianenko

Due to their computational complexity, graph cuts for cluster detection and identification are used mostly in the form of convex relaxations. We propose to utilize the original graph cuts such as Ratio, Normalized or Cheeger Cut to detect…

Data Structures and Algorithms · Computer Science 2024-10-15 Leo Suchan , Housen Li , Axel Munk

The percolation properties of clustered networks are analyzed in detail. In the case of weak clustering, we present an analytical approach that allows to find the critical threshold and the size of the giant component. Numerical simulations…

Disordered Systems and Neural Networks · Physics 2009-11-11 M. Angeles Serrano , Marian Boguna

Mixed data comprises both numeric and categorical features, and mixed datasets occur frequently in many domains, such as health, finance, and marketing. Clustering is often applied to mixed datasets to find structures and to group similar…

Machine Learning · Computer Science 2019-03-20 Amir Ahmad , Shehroz S. Khan

We propose a new method for hierarchical clustering based on the optimisation of a cost function over trees of limited depth, and we derive a message--passing method that allows to solve it efficiently. The method and algorithm can be…

Disordered Systems and Neural Networks · Physics 2015-05-14 M. Bailly-Bechet , S. Bradde , A. Braunstein , A. Flaxman , L. Foini , R. Zecchina

After generalizing the concept of clusters to incorporate clusters that are linked to other clusters through some relatively narrow bridges, an approach for detecting patches of separation between these clusters is developed based on an…

Computer Vision and Pattern Recognition · Computer Science 2020-01-10 Luciano da F. Costa

Complex systems are usually represented as an intricate set of relations between their components forming a complex graph or network. The understanding of their functioning and emergent properties are strongly related to their structural…

Data Analysis, Statistics and Probability · Physics 2014-01-08 Sergio Gomez , Alberto Fernandez , Clara Granell , Alex Arenas

This paper considers networks where relationships between nodes are represented by directed dissimilarities. The goal is to study methods for the determination of hierarchical clusters, i.e., a family of nested partitions indexed by a…

Machine Learning · Computer Science 2014-09-03 Gunnar Carlsson , Facundo Mémoli , Alejandro Ribeiro , Santiago Segarra

The graph theoretic properties of the clustering coefficient, characteristic (or average) path length, global and local efficiency, provide valuable information regarding the structure of a graph. These four properties have applications to…

Combinatorics · Mathematics 2017-09-25 Alexander Strang , Oliver Haynes , Nathan D. Cahill , Darren A. Narayan

The description of complex configuration is a difficult issue. We present a powerful technique for cluster identification and characterization. The scheme is designed to treat with and analyze the experimental and/or simulation data from…

Statistical Mechanics · Physics 2013-08-29 Guangcai Zhang , Aiguo Xu , Guo Lu , Zeyao Mo

It has been shown that many complex networks shared distinctive features, which differ in many ways from the random and the regular networks. Although these features capture important characteristics of complex networks, their applicability…

Physics and Society · Physics 2009-11-11 Chang-Yong Lee , Sunghwan Jung

We describe the conditions under which a set of continuous variables or characters can be described as an X-tree or a split network. A distance matrix corresponds exactly to a split network or a valued X-tree if, after ordering of the taxa,…

Quantitative Methods · Quantitative Biology 2009-06-11 Marc Thuillard , Didier Fraix-Burnet