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In this work, we report a new method to simulate active Brownian particles (ABPs) in molecular dynamics (MD) simulations. Immersed in a fluid, each ABP consists of a head particle and a spherical phantom region of fluid where the flagellum…

Soft Condensed Matter · Physics 2019-02-15 Liya Wang , Xinpeng Xu , Zhigang Li , Tiezheng Qian

Motility-induced phase separation (MIPS) is of great importance and has been extensively researched in overdamped systems, nevertheless, what impacts inertia will bring on kinetics of MIPS is lack of investigation. Here, we find that, not…

Soft Condensed Matter · Physics 2020-09-09 Jie Su , Huijun Jiang , Zhonghuai Hou

We consider the dynamics of a microswimmer and show that they can be approximated by active Brownian motion. The swimmer is modeled by coupled overdamped Langevin equations with periodic driving. We compare the energy dissipation of the…

Statistical Mechanics · Physics 2019-01-16 Jannik Ehrich , Marcel Kahlen

We show that the force generated by active enzyme molecules are strong enough to influence the dynamics of their surroundings under artificial crowded environments. We measured the behavior of polymer microparticles in a…

Soft Condensed Matter · Physics 2023-05-10 Arnab Maiti , Yuki Koyano , Hiroyuki Kitahata , Krishna Kanti Dey

We study numerically a model for active suspensions of self-propelled repulsive particles, for which a stable phase separation into a dilute and a dense phase is observed. We exploit that for non-square boxes a stable "slab" configuration…

Statistical Mechanics · Physics 2015-09-02 Julian Bialké , Hartmut Löwen , Thomas Speck

Non-equilibrium clustering and percolation are investigated in an archetypal model of two-dimensional active matter using dynamic simulations of self-propelled Brownian repulsive particles. We concentrate on the single-phase region up to…

Statistical Mechanics · Physics 2024-09-09 David Evans , José Martín-Roca , Nathan J. Harmer , Chantal Valeriani , Mark A. Miller

Multiparticle collision dynamics is a modern coarse-grained simulation technique to treat the hydrodynamics of Newtonian fluids by solving the Navier-Stokes equations. Naturally, it also includes thermal noise. Initially it has been applied…

Soft Condensed Matter · Physics 2018-05-17 Andreas Zöttl , Holger Stark

We have developed a simulation model to study the hydrodynamic flow fields around Brownian colloidal particles with an active surface patch. Hydrodynamics is introduced by modeling low-Reynolds-number fluid flows around a colloid using…

Motility-induced phase separation (MIPS) leads to cohesive active matter in the absence of cohesive forces. We present, extend and illustrate a recent generalized thermodynamic formalism which accounts for its binodal curve. Using this…

Statistical Mechanics · Physics 2018-10-11 Alexandre P. Solon , Joakim Stenhammar , Michael E. Cates , Yariv Kafri , Julien Tailleur

Simulation studies of the phase diagram of repulsive active Brownian particles in three dimensions reveal that the region of motility-induced phase separation between a high and low density phase is enclosed by a region of gas-crystal phase…

Statistical Mechanics · Physics 2021-01-27 Francesco Turci , Nigel B. Wilding

Suspensions of purely repulsive but self-propelled Brownian particles might undergo phase separation, a phenomenon that strongly resembles the phase separation of passive particles with attractions. Here we employ computer simulations to…

Statistical Mechanics · Physics 2016-08-05 David Richard , Hartmut Löwen , Thomas Speck

Microswimmers play an important role in shaping the world around us. The squirmer is a simple model for microswimmer whose cilia oscillations on its spherical surface induce an effective slip velocity to propel itself. The rapid development…

Fluid Dynamics · Physics 2024-11-22 Xinwei Cai , Kuiliang Wang , Gaojin Li , Xin Bian

The effect of curvature on an ensemble of repulsive active Brownian particles (ABPs) moving on a spherical surface is studied. Surface curvature strongly affects the dynamics of ABPs, as it introduces a new time scale $\tau=R/v_0$, with…

Soft Condensed Matter · Physics 2024-06-04 Priyanka Iyer , Roland G. Winkler , Dmitry A. Fedosov , Gerhard Gompper

The conformational and dynamical properties of active Brownian polymers embedded in a fluid depend on the nature of the driving mechanism, e.g., self-propulsion or external actuation of the monomers. Implementations of self-propelled and…

Soft Condensed Matter · Physics 2022-01-24 Judit Clopés Llahí , Aitor Martín-Gómez , Gerhard Gompper , Roland G. Winkler

Motility-induced phase separation, MIPS, is arguably the most well-studied collective phenomenon occurring in active matter without alignment interactions (scalar active matter). Its basic origin is simple: since self-propelled particles…

Soft Condensed Matter · Physics 2021-12-10 Joakim Stenhammar

We computationally studied the phase behavior and dynamics of binary mixtures of active particles, where each 'species' had distinct activities leading to distinct velocities, fast and slow. We obtained phase diagrams demonstrating…

Soft Condensed Matter · Physics 2019-09-09 Thomas Kolb , Daphne Klotsa

Dynamic particle-scale numerical simulations are used to show that the shear thickening observed in dense colloidal, or Brownian, suspensions is of a similar nature to that observed in non-colloidal suspensions, i.e., a stress-induced…

Soft Condensed Matter · Physics 2015-12-04 Romain Mari , Ryohei Seto , Jeffrey F. Morris , Morton M. Denn

We study the role of hydrodynamic interactions in the collective behaviour of collections of microscopic active particles suspended in a fluid. We introduce a novel calculational framework that allows us to separate the different…

Soft Condensed Matter · Physics 2017-09-06 Natsuhiko Yoshinaga , Tanniemola B. Liverpool

In this paper we provide high precision estimates of the phase diagram of active Brownian particles. We extract coexisting densities from simulations of phase separated states in an elongated box (slab geometry) which minimizes finite-size…

Soft Condensed Matter · Physics 2017-08-16 Jonathan Tammo Siebert , Janina Letz , Thomas Speck , Peter Virnau

A simple model for simulating flows of active suspensions is investigated. The approach is based on dissipative particle dynamics. While the model is potentially applicable to a wide range of self-propelled particle systems, the specific…

Fluid Dynamics · Physics 2015-10-08 Denis F. Hinz , Alexander Panchenko , Tae-Yeon Kim , Eliot Fried