Related papers: A geometrical approach to computing free energy la…
This mini-review discusses the recent contribution of theoretical and computational physics as well as experimental efforts to the understanding of the behavior of colloidal particles in confined geometries and at liquid crystalline…
To celebrate Hans Frauenfelder's achievements, we examine energy(-like) "landscapes" for complex living systems. Energy landscapes summarize all possible dynamics of some physical systems. Energy(-like) landscapes can explain some…
We study two interacting quantum particles forming a bound state in $d$-dimensional free space, and constrain the particles in $k$ directions to $(0,\infty)^k \times \mathbb{R}^{d-k}$, with Neumann boundary conditions. First, we prove that…
We apply well-established concepts of Langevin sampling to derive a new class of algorithms for the efficient computation of free energy differences of fluctuating particles embedded in a 'fast' membrane, i.e., a membrane that…
We develop a quantum algorithm for estimating the free energy as well as the total Gibbs state of interacting quantum Coulomb gases and molecular systems in dimensions $d \in \{2,3\}$ at finite temperature. These systems lie beyond the…
We consider the mean field Fokker-Planck equation subject to nonlinear no-flux boundary conditions, which necessarily arise when subjecting a system of Brownian particles interacting via a pair potential in a bounded domain. With the…
With the help of a simple 20 letters, lattice model of heteropolymers, we investigate the energy landscape in the space of designed good-folder sequences. Low-energy sequences form clusters, interconnected via neutral networks, in the space…
The near-native free energy landscape of protein G is investigated through 0.4 microseconds-long atomistic molecular dynamics simulations in explicit solvent. A theoretical and computational framework is used to assess the time-dependence…
We propose a way to analyze the landscape geometry explored by a glassy system after a quench solely based on time series of energy values recorded during a simulation. Entry and exit times for landscape `valleys' are defined operationally…
The energy of an elastic manifold in a random landscape at T=0 is shown numerically to obey a probability distribution that depends on size of the box it is put into. If the extent of the spatial fluctuations of the manifold is much less…
In a recent paper [J. Math. Phys. 47 082303 (2006)], Quantum Energy Inequalities were used to place simple geometrical bounds on the energy densities of quantum fields in Minkowskian spacetime regions. Here, we refine this analysis for…
We report on a study of a finite system of classical confined particles in two-dimensions in the presence of a uniform magnetic field and interacting via a two-body repulsive potential. We develop a simple analytical method of analysis to…
We initiate the development of a horizon-based initial (or rather final) value formalism to describe the geometry and physics of the near-horizon spacetime: data specified on the horizon and a future ingoing null boundary determine the…
We present a comprehensive description of vector chromatography that includes deterministic and stochastic transport in 1D-periodic free-energy landscapes, with both energetic and entropic contributions, and highlights the parameters…
A classic no-go theorem in one-dimensional quantum mechanics can be evaded when the potentials are unbounded below, thus allowing for novel parity-paired degenerate energy bound states. We numerically determine the spectrum of one such…
Starting from the geometric description of quantum systems, we propose a novel approach to time-independet dissipative quantum processes according to which the energy is dissipated but the coherence of the states is preserved. Our proposal…
We study the global influence of curvature on the free energy landscape of two-dimensional binary mixtures confined on closed surfaces. Starting from a generic effective free energy, constructed on the basis of symmetry considerations and…
Energy levels are investigated for two charged particles possessing an attractive, momentum-independent, zero-range interaction in a uniform magnetic field. A transcendental equation governs the spectrum, which is characterized by a…
The role of the potential energy landscape in determining the relaxation dynamics of model clusters is studied using a master equation. Two types of energy landscape are examined: a single funnel, as exemplified by 13-atom Morse clusters,…
We combine experiments and numerical simulations to investigate the emergence of clogging in a system of interacting paramagnetic colloidal particles driven against a disordered landscape of larger obstacles. We consider a single aperture…