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One of the most compelling problems in science consists in understanding how living systems process information. After all, the way they process information defines their capacities to learning and adaptation. There is an increasing…

Adaptation and Self-Organizing Systems · Physics 2017-04-21 Carlos Eduardo Maldonado

Provided that there is no theoretical frame for complex engineered systems (CES) as yet, this paper claims that bio-inspired engineering can help provide such a frame. Within CES bio-inspired systems play a key role. The disclosure from…

Other Computer Science · Computer Science 2011-10-18 Nelson Alfonso Gómez-Cruz , Carlos Eduardo Maldonado

The applicability of computational models to the biological world is an active topic of debate. We argue that a useful path forward results from abandoning hard boundaries between categories and adopting an observer-dependent, pragmatic…

Multiagent Systems · Computer Science 2022-12-22 Joshua Bongard , Michael Levin

The fields of computing and biology have begun to cross paths in new ways. In this paper a review of the current research in biological computing is presented. Fundamental concepts are introduced and these foundational elements are explored…

Computational Engineering, Finance, and Science · Computer Science 2009-11-10 Balaji Akula , James Cusick

Hypercomputation is a relatively new branch of computer science that emerged from the idea that the Church--Turing Thesis, which is supposed to describe what is computable and what is noncomputable, cannot possible be true. Because of its…

Other Computer Science · Computer Science 2009-10-12 Apostolos Syropoulos

``The purpose of life is to obtain knowledge, use it to live with as much satisfaction as possible, and pass it on with improvements and modifications to the next generation.'' This may sound philosophical, and the interpretation of words…

Quantum Physics · Physics 2007-05-23 Apoorva Patel

Due to common misconceptions about the Church-Turing thesis, it has been widely assumed that the Turing machine provides an upper bound on what is computable. This is not so. The new field of hypercomputation studies models of computation…

Logic · Mathematics 2007-05-23 Toby Ord

Living systems, from single cells to higher vertebrates, receive a continuous stream of non-stationary inputs that they sense, e.g., via cell surface receptors or sensory organs. Integrating these time-varying, multi-sensory, and often…

Other Quantitative Biology · Quantitative Biology 2024-04-17 Daniel Koch , Akhilesh Nandan , Gayathri Ramesan , Aneta Koseska

One of the defining features of living systems is their adaptability to changing environmental conditions. This requires organisms to extract temporal and spatial features of their environment, and use that information to compute the…

Neurons and Cognition · Quantitative Biology 2024-02-27 Maria Sol Vidal-Saez , Oscar Vilarroya , Jordi Garcia-Ojalvo

The purpose of this thesis is to make an analysis of the concept of Hypercomputation and of some hypermachines. This thesis is separated in three main parts. We start in the first chapter with an analysis of the concept of Classical…

Computational Complexity · Computer Science 2012-10-29 Gentian Kasa

Computing is a high-level process of a physical system. Recent interest in non-standard computing systems, including quantum and biological computers, has brought this physical basis of computing to the forefront. There has been, however,…

Emerging Technologies · Computer Science 2023-04-21 Dominic Horsman , Susan Stepney , Rob C. Wagner , Viv Kendon

In living systems, we often see the emergence of the ingredients necessary for computation -- the capacity for information transmission, storage, and modification -- begging the question of how we may exploit or imitate such biological…

Neurons and Cognition · Quantitative Biology 2020-09-11 Kristine Heiney , Gunnar Tufte , Stefano Nichele

What does it mean to claim that a physical or natural system computes? One answer, endorsed here, is that computing is about programming a system to behave in different ways. This paper offers an account of what it means for a physical…

Information Theory · Computer Science 2013-06-18 Hector Zenil

The aim of this paper is to give an overview of brain organoid computing, its characteristics, challenges, as well as possible advantages for future applications in the field of artificial intelligence. An important part is the extensive…

Emerging Technologies · Computer Science 2025-11-04 Yannic Talavera , Bernd Ulmann

Computing in the life sciences has undergone a transformative evolution, from early computational models in the 1950s to the applications of artificial intelligence (AI) and machine learning (ML) seen today. This paper highlights key…

Other Quantitative Biology · Quantitative Biology 2024-06-21 Samuel A. Donkor , Matthew E. Walsh , Alexander J. Titus

This paper discusses "computational" systems capable of "computing" functions not computable by predefined Turing machines if the systems are not isolated from their environment. Roughly speaking, these systems can change their finite…

Artificial Intelligence · Computer Science 2009-08-03 Kurt Ammon

Many real-world dynamic systems, both natural and artificial, are understood to be performing computations. For artificial dynamic systems, explicitly designed to perform computation - such as digital computers - by construction, we can…

Computational Physics · Physics 2026-02-24 David H. Wolpert , Jan Korbel

The aim of this paper is to propose an alternative behavioural definition of computation (and of a computer) based simply on whether a system is capable of reacting to the environment-the input-as reflected in a measure of programmability.…

Logic in Computer Science · Computer Science 2012-11-26 Hector Zenil

Life is confronted with computation problems in a variety of domains including animal behavior, single-cell behavior, and embryonic development. Yet we currently do not know of a naturally existing biological system that is capable of…

Other Quantitative Biology · Quantitative Biology 2022-03-10 Hessameddin Akhlaghpour

Artificial computing machinery transforms representations through an objective process, to be interpreted subjectively by humans, so the machine and the interpreter are different entities, but in the putative natural computing both…

Artificial Intelligence · Computer Science 2025-06-17 Luis A. Pineda
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