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The dynamics of a neural model for hippocampal place cells storing spatial maps is studied. In the absence of external input, depending on the number of cells and on the values of control parameters (number of environments stored, level of…

Neurons and Cognition · Quantitative Biology 2014-03-19 Rémi Monasson , Sophie Rosay

The behaviour and functioning of a variety of complex physical and biological systems depend on the spatial organisation of their constituent units, and on the presence and formation of clusters of functionally similar or related…

Physics and Society · Physics 2023-08-16 Silvia Rognone , Vincenzo Nicosia

We consider Markov jump processes describing structured populations with interactions via density dependance. We propose a Markov construction with a distinguished individual which allows to describe the random tree and random sample at a…

Probability · Mathematics 2022-07-20 Vincent Bansaye

Polymer models are a widely used tool to study the prebiotic formation of metabolism at the origins of life. Counts of the number of reactions in these models are often crucial in probabilistic arguments concerning the emergence of…

Molecular Networks · Quantitative Biology 2021-04-14 Oliver Weller-Davies , Mike Steel , Jotun Hein

We present a family of one-dimensional cellular automata modeling the diffusion of an innovation in a population. Starting from simple deterministic rules, we construct models parameterized by the interaction range and exhibiting a…

adap-org · Physics 2023-12-18 Nino Boccara , Henryk Fuks

We consider the problem of efficiently simulating population protocols. In the population model, we are given a distributed system of $n$ agents modeled as identical finite-state machines. In each time step, a pair of agents is selected…

Data Structures and Algorithms · Computer Science 2020-05-08 Petra Berenbrink , David Hammer , Dominik Kaaser , Ulrich Meyer , Manuel Penschuck , Hung Tran

We consider a spatial version of the classical Moran model with seed-banks where the constituent populations have finite sizes. Individuals live in colonies labelled by $\mathbb{Z}^d$, $d\geq 1$, playing the role of a geographic space,…

Probability · Mathematics 2023-02-07 Frank den Hollander , Shubhamoy Nandan

This paper studies a flocking model in which the interaction between agents is described by a general local nonlinear function depending on the distance between agents.

Optimization and Control · Mathematics 2019-12-24 Ge Chen , Zhixin Liu

For past several decades, research efforts in population modelling has proven its efficacy in understanding the basic information about residential and commercial areas, as well as for the purposes of planning, development and improvement…

Social and Information Networks · Computer Science 2016-06-29 Gautam S. Thakur , Kevin A. Sparks , Robert N. Stewart , Marie L. Urban , Budhendra L. Bhaduri

Microbes produce metabolic resources that are important for cell growth yet leak across membranes into the extracellular environment. Other microbes in the same environment can use these resources and adjust their own metabolic production…

Populations and Evolution · Quantitative Biology 2018-01-16 Yoav Kallus , John H. Miller , Eric Libby

The prediction of the behavior of the disease, the level of affectation in a population and the ways to control it are the most important aspects studied by epidemiology using tools such as historical data and mathematical models. So, our…

Dynamical Systems · Mathematics 2022-04-04 Jorge Andrés Ibáñez Huertas , Carlos Isaac Zainea Maya

Relationship between agents can be conveniently represented by graphs. When these relationships have different modalities, they are better modelled by multilayer graphs where each layer is associated with one modality. Such graphs arise…

Machine Learning · Statistics 2021-03-05 Guillaume Braun , Hemant Tyagi , Christophe Biernacki

The majority of solid tumours arise in epithelia and therefore much research effort has gone into investigating the growth, renewal and regulation of these tissues. Here we review different mathematical and computational approaches that…

Tissues and Organs · Quantitative Biology 2019-12-23 O. J. Maclaren , A. G. Fletcher , H. M. Byrne , P. K. Maini

The principles of neural encoding and computations are inherently collective and usually involve large populations of interacting neurons with highly correlated activities. While theories of neural function have long recognized the…

Neurons and Cognition · Quantitative Biology 2019-05-14 Christophe Gardella , Olivier Marre , Thierry Mora

We discuss a simple model of co-evolution. In order to emphasise the effect of interaction between individuals the entire population is subjected to the same physical environment. Species are emergent structures and extinction, origination…

Statistical Mechanics · Physics 2007-05-23 Kim Christensen , Simone A. di Collobiano , Matt Hall , Henrik J. Jensen

Orderliness, reflected via mathematical laws, is encountered in different frameworks involving social groups. Here we show that a thermodynamics can be constructed that macroscopically describes urban population flows. Microscopic dynamic…

Physics and Society · Physics 2015-04-30 A. Hernando , A. Plastino

There is growing interest in producing estimates of demographic and global health indicators in populations with limited data. Statistical models are needed to combine data from multiple data sources into estimates and projections with…

Methodology · Statistics 2022-12-02 Herbert Susmann , Monica Alexander , Leontine Alkema

Population protocols are a model of distributed computation intended for the study of networks of independent computing agents with dynamic communication structure. Each agent has a finite number of states, and communication opportunities…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-09-02 Michael Raskin

We study the dynamics of a system composed of interacting units each with a complex internal structure comprising many subunits. We consider the case in which each subunit grows in a multiplicative manner. We propose a model for such…

Statistical Mechanics · Physics 2009-10-30 L. A. N. Amaral , S. V. Buldyrev , S. Havlin , M. A. Salinger , H. E. Stanley

A simple, but ``classical``, stochastic model for epidemic spread in a finite, but large, population is studied. The progress of the epidemic can be divided into three different phases that requires different tools to analyse. Initially the…

Populations and Evolution · Quantitative Biology 2018-05-29 Åke Svensson
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