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Related papers: Docking Studies on HIV Integrase Inhibitors Based …

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RNA/protein interactions play crucial roles in controlling gene expression. They are becoming important targets for pharmaceutical applications. Due to RNA flexibility and to the strength of electrostatic interactions, standard docking…

Biomolecules · Quantitative Biology 2013-07-23 Trang N. Do , Paolo Carloni , Gabriele Varani , Giovanni Bussi

This paper examines the pattern of HIV risk behaviors among male jail detainees. From multivariate analyses of baseline data from an HIV intervention study of ours, we find that: (1) cocaine use, heroin use and multiple sexual partners; and…

Applications · Statistics 2019-04-05 Tao Liu , Lauri Bazerman , Megan Pinkston , Amy Nunn , Aadia Rana , Curt G. Beckwith

The search to understand how the HIV virus spreads inside the human body and how the immune response works to control it has motivated studies related to Mathematical Immunology. Actually, researches include the idea of mathematical models…

Populations and Evolution · Quantitative Biology 2016-01-19 Marcelo Margon Rossi , Luis Fernandez Lopez

Oxidative stress, a reaction caused by the imbalance between the reactive oxygen species of human organism and its ability to detoxify reactive intermediates and to repair the resulting damage plays an important role in HIV-infections. On…

Populations and Evolution · Quantitative Biology 2018-08-08 Shaoli Wang , Fei Xu , Xinyu Song

A central challenge in Human Immunodeficiency Virus (HIV) public health policy lies in determining whether to universally expand treatment access, despite the risk of sub-optimal adherence and consequent drug resistance, or to adopt a more…

Quantitative Methods · Quantitative Biology 2025-07-16 Ashish Poonia , Siddhartha P. Chakrabarty

Purpose: We seek to use neural networks (NNs) to solve a well-known system of differential equations describing the balance between T cells and HIV viral burden. Materials and Methods: In this paper, we employ a 3-input parallel NN to…

Quantitative Methods · Quantitative Biology 2021-02-18 Joseph Stember , Parvathy Jayan , Hrithwik Shalu

In recent years, it is evidenced that the individuals newly infected HIV are transmitting the virus prior to knowing their HIV status. Identifying individuals that are early in infection with HIV antibody negative (window period) remains…

Mesoscale and Nanoscale Physics · Physics 2016-08-15 L. Li , K. Y. Mak , Y. Zhou , W. W. Wang , P. W. T. Pong

The extent to which ART (anti-retroviral therapy) reduces HIV transmission has received attention in recent years. Using data on the relationship between transmission and viral load we show that transmission saturates at high viral loads.…

Quantitative Methods · Quantitative Biology 2011-08-25 Brian G Williams

We propose a population model for HIV-TB co-infection dynamics by considering treatments for HIV infection, active tuberculosis and co-infection. The HIV only and TB only models are analyzed separately, as well as full model. The basic…

Populations and Evolution · Quantitative Biology 2018-08-10 Sachin Kumar , Shikha Jain

In [Math. Comput. Sci. 12 (2018), no. 2, 111--127], a delayed model describing the dynamics of the Human Immunodeficiency Virus (HIV) with Cytotoxic T Lymphocytes (CTL) immune response is investigated by Allali, Harroudi and Torres. Here,…

Dynamical Systems · Mathematics 2022-10-03 Sandra Vaz , Delfim F. M. Torres

Predicting how protein mutations affect drug binding remains a major challenge, particularly when the mutations are distal from the binding site. In this study, we introduce a coupled simulation workflow that combines long-time-scale…

Chemical Physics · Physics 2026-03-30 William Dawson , Louis Beal , Marco Zaccaria , Luigi Genovese

HIV is a deadly virus transmitted either through having of unprotected sex, mother to child transmission, sharing of unsterilized objects that is capable of making cut or wounds on the body, through blood or bodily fluid transmission. AIDS…

Populations and Evolution · Quantitative Biology 2016-09-19 M. O. Oladejo , Ali Onuche John

We propose and study a new mathematical model of the human immunodeficiency virus (HIV). The main novelty is to consider that the antibody growth depends not only on the virus and on the antibodies concentration but also on the uninfected…

Optimization and Control · Mathematics 2022-01-26 Karam Allali , Sanaa Harroudi , Delfim F. M. Torres

We consider the basic model of virus dynamics in the modeling of Human Immunodeficiency Virus (HIV), in a 2D heterogenous environment. It consists of two ODEs for the non-infected and infected $CD_4^+$ $T$ lymphocytes, $T$ and $I$, and a…

Dynamical Systems · Mathematics 2009-05-14 Claude-Michel Brauner , Danaelle Jolly , Luca Lorenzi , Rodolphe Thiebaut

As part of a program to develop compounds with potential to treat cocaine abuse, eleven (+/-)-threo-methylphenidate (TMP; Ritalin) derivatives were synthesized and tested in rat striatal tissue preparations for inhibitory potency against…

Biomolecules · Quantitative Biology 2014-05-01 Howard M. Deutsch , Xiaocong Michael Ye , Margaret M. Schweri

Incidence estimation of HIV infection can be performed using recent infection testing algorithm (RITA) results from a cross-sectional sample. This allows practitioners to understand population trends in the HIV epidemic without having to…

Methodology · Statistics 2023-09-13 Marlena Bannick , Deborah Donnell , Richard Hayes , Oliver Laeyendecker , Fei Gao

Coronavirus disease 2019 (COVID-19) has impacted almost every part of human life worldwide, posing a massive threat to human health. There is no specific drug for COVID-19, highlighting the urgent need for the development of effective…

Genomics · Quantitative Biology 2020-12-07 Zhihan Wang , Kai Guo , Pan Gao , Qinqin Pu , Min Wu , Changlong Li , Junguk Hur

Drug repositioning offers an effective solution to drug discovery, saving both time and resources by finding new indications for existing drugs. Typically, a drug takes effect via its protein targets in the cell. As a result, it is…

Quantitative Methods · Quantitative Biology 2018-11-26 Maryam Lotfi Shahreza , Nasser Ghadiri , Seyed Rasul Mossavi , Jaleh Varshosaz , James Green

Intrapatient HIV-1 evolution is dominated by selection on the protein level in the arms race with the adaptive immune system. When cytotoxic CD8+ T-cells or neutralizing antibodies target a new epitope, the virus often escapes via…

Populations and Evolution · Quantitative Biology 2014-03-25 Fabio Zanini , Richard A. Neher

Histone deacetylase (HDAC) and Histone acetyl-transferase (HAT) are enzymes that influence transcription by selectively deacetylating or acetylating the (epsilon)-amino groups of lysine located near the amino termini of core histone…

Biomolecules · Quantitative Biology 2012-09-14 Maria Antony Dhivyan JE , Anoop MN
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