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In this paper, we study random embeddings of polymer networks distributed according to any potential energy which can be expressed in terms of distances between pairs of monomers. This includes freely jointed chains, steric effects,…

Statistical Mechanics · Physics 2022-05-19 Jason Cantarella , Tetsuo Deguchi , Clayton Shonkwiler , Erica Uehara

Given a collection of vertex-aligned networks and an additional label-shuffled network, we propose procedures for leveraging the signal in the vertex-aligned collection to recover the labels of the shuffled network. We consider matching the…

Machine Learning · Statistics 2023-03-31 Zhirui Li , Jesus Arroyo , Konstantinos Pantazis , Vince Lyzinski

We consider a random graph model evolving in discrete time-steps that is based on 3-interactions among vertices. Triangles, edges and vertices have different weights; objects with larger weight are more likely to participate in future…

Probability · Mathematics 2011-12-02 Ágnes Backhausz , Tamás F. Móri

We propose a new family of combinatorial inference problems for graphical models. Unlike classical statistical inference where the main interest is point estimation or parameter testing, combinatorial inference aims at testing the global…

Statistics Theory · Mathematics 2018-02-14 Matey Neykov , Junwei Lu , Han Liu

We generalize finite-sample bounds for convex clustering to the setting where affinity weights appearing in the objective correspond to a general connected graph. These bounds and their analysis lead to a better understanding of clustering…

Machine Learning · Statistics 2026-05-26 Sam Rosen , Jason Xu

Baker devised a powerful technique to obtain approximation schemes for various problems restricted to planar graphs. Her technique can be directly extended to various other graph classes, among the most general ones the graphs avoiding a…

Discrete Mathematics · Computer Science 2017-04-04 Zdeněk Dvořák

Statistical inference for exponential-family models of random graphs with dependent edges is challenging. We stress the importance of additional structure and show that additional structure facilitates statistical inference. A simple…

Statistics Theory · Mathematics 2020-03-13 Michael Schweinberger , Jonathan Stewart

Structure learning methods for covariance and concentration graphs are often validated on synthetic models, usually obtained by randomly generating: (i) an undirected graph, and (ii) a compatible symmetric positive definite (SPD) matrix. In…

Methodology · Statistics 2020-08-20 Irene Córdoba , Gherardo Varando , Concha Bielza , Pedro Larrañaga

In the last two decades we are witnessing a huge increase of valuable big data structured in the form of graphs or networks. To apply traditional machine learning and data analytic techniques to such data it is necessary to transform graphs…

Machine Learning · Computer Science 2024-03-22 Aleksandar Tomčić , Miloš Savić , Miloš Radovanović

In recent work, the authors developed a simple method of constructing topological spaces from certain well-behaved partially ordered sets -- those coming from sequences of relations between finite sets. This method associates a given poset…

General Topology · Mathematics 2025-09-11 Adam Bartoš , Tristan Bice , Alessandro Vignati

A natural approach to analyze interaction data of form "what-connects-to-what-when" is to create a time-series (or rather a sequence) of graphs through temporal discretization (bandwidth selection) and spatial discretization (vertex…

Machine Learning · Statistics 2015-01-13 Nam H. Lee , Carey Priebe , Youngser Park , I-Jeng Wang , Michael Rosen

Numerous studies show that most known real-world complex networks share similar properties in their connectivity and degree distribution. They are called small worlds. This article gives a method to turn random graphs into Small World…

Data Structures and Algorithms · Computer Science 2008-12-18 Bruno Gaume , Fabien Mathieu

We establish zero-one laws and convergence laws for monadic second-order logic (MSO) (and, a fortiori, first-order logic) on a number of interesting graph classes. In particular, we show that MSO obeys a zero-one law on the class of…

Logic in Computer Science · Computer Science 2023-06-22 Anuj Dawar , Eryk Kopczyński

Consider a family $\mathcal{T}$ of 3-connected graphs of moderate growth, and let $\mathcal{G}$ be the class of graphs whose 3-connected components are graphs in $\mathcal{T}$. We present a general framework for analyzing such graphs…

Combinatorics · Mathematics 2009-07-03 Omer Gimenez , Marc Noy , Juanjo Rue

Graph embedding maps a graph into a convenient vector-space representation for graph analysis and machine learning applications. Many graph embedding methods hinge on a sampling of context nodes based on random walks. However, random walks…

Machine Learning · Computer Science 2021-10-18 Sadamori Kojaku , Jisung Yoon , Isabel Constantino , Yong-Yeol Ahn

The structure of many real networks is not locally tree-like and hence, network analysis fails to characterise their bond percolation properties. In a recent paper [P. Mann, V. A. Smith, J. B. O. Mitchell, and S. Dobson, Percolation in…

Physics and Society · Physics 2021-01-27 Peter Mann , V. Anne Smith , John B. O. Mitchell , Simon Dobson

Graphs derived from groups are a widely studied class of graphs, motivated by their highly symmetric structure. In particular, G-graphs offer an easy and interesting alternative construction of semi-symmetric graphs. After recalling the…

Combinatorics · Mathematics 2016-11-25 David Ellison , Ruxandra Marinescu-Ghemeci , Cerasela Tanasescu

Since their introduction by Kipf and Welling in $2017$, a primary use of graph convolutional networks is transductive node classification, where missing labels are inferred within a single observed graph and its feature matrix. Despite the…

Machine Learning · Statistics 2025-09-09 Nils Detering , Luca Galimberti , Anastasis Kratsios , Giulia Livieri , A. Martina Neuman

We consider, for every positive integer $a$, probability distributions on subsets of vertices of a graph with the property that every vertex belongs to the random set sampled from this distribution with probability at most $1/a$. Among…

Combinatorics · Mathematics 2019-07-31 Zdeněk Dvořák , Jean-Sébastien Sereni

We formalize the problem of detecting a community in a network into testing whether in a given (random) graph there is a subgraph that is unusually dense. We observe an undirected and unweighted graph on N nodes. Under the null hypothesis,…

Statistics Theory · Mathematics 2013-03-01 Ery Arias-Castro , Nicolas Verzelen