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Genetic sequence data of pathogens are increasingly used to investigate transmission dynamics in both endemic diseases and disease outbreaks; such research can aid in development of appropriate interventions and in design of studies to…

Quantitative Methods · Quantitative Biology 2018-01-24 Hesam Montazeri , Susan Little , Niko Beerenwinkel , Victor DeGruttola

Recent work has proven the existence of extreme inbreeding in a European ancestry sample taken from the contemporary UK population \cite{nature_01}. This result brings our attention again to a math problem related to inbreeding family trees…

Populations and Evolution · Quantitative Biology 2021-09-08 C. Jarne , F A. Gómez Albarracín , M. Caruso

In this paper, we consider the linearly reinforced and the once-reinforced random walk models in the transient phase on trees. We show the large deviations for the upper tails for both models. We also show the exponential decay for the…

Probability · Mathematics 2013-10-15 Yu Zhang

A degree sequence is a sequence ${\bf s}=(N_i,i\geq 0)$ of non-negative integers satisfying $1+\sum_i iN_i=\sum_i N_i<\infty$. We are interested in the uniform distribution $\mathbb{P}_{{\bf s}}$ on rooted plane trees whose degree sequence…

Probability · Mathematics 2020-08-28 Osvaldo Angtuncio , Gerónimo Uribe Bravo

The celebrated Heinz inequality asserts that $ 2|||A^{1/2}XB^{1/2}|||\leq |||A^{\nu}XB^{1-\nu}+A^{1-\nu}XB^{\nu}|||\leq |||AX+XB|||$ for $X \in \mathbb{B}(\mathscr{H})$, $A,B\in \+$, every unitarily invariant norm $|||\cdot|||$ and $\nu \in…

Functional Analysis · Mathematics 2021-07-23 R. Kaur , M. S. Moslehian , M. Singh , C. Conde

This work addresses an enumeration problem on weighted bi-colored plane trees with prescribed vertex data, with all vertices labeled distinctly. We give a bijection proof of the enumeration formula originally due to Kochetkov, hence…

Combinatorics · Mathematics 2026-01-13 Sicheng Lu , Yi Song

In mathematical population genetics, it is well known that one can represent the genealogy of a population by a tree, which indicates how the ancestral lines of individuals in the population coalesce as they are traced back in time. As the…

Probability · Mathematics 2014-02-20 Götz Kersting , Jason Schweinsberg , Anton Wakolbinger

We derive tractable criteria for the consistency of Bayesian tree reconstruction procedures, which constitute a central class of algorithms for inferring common ancestry among DNA sequence samples in phylogenetics. Our results encompass…

Statistics Theory · Mathematics 2025-08-05 Alisa Kirichenko , Luke J. Kelly , Jere Koskela

In discrete contexts such as the degree distribution for a graph, \emph{scale-free} has traditionally been \emph{defined} to be \emph{power-law}. We propose a reasonable interpretation of \emph{scale-free}, namely, invariance under the…

Probability · Mathematics 2014-07-01 Richard Arratia , Thomas M. Liggett , Malcolm J. Williamson

The circular descent of a permutation $\sigma$ is a set $\{\sigma(i)\mid \sigma(i)>\sigma(i+1)\}$. In this paper, we focus on the enumerations of permutations by the circular descent set. Let $cdes_n(S)$ be the number of permutations of…

Combinatorics · Mathematics 2008-06-05 Hungyung Chang , Jun Ma , Yeong-Nan Yeh

General revision. In particular the parts concerning involutive bases over rings have been significantly changed. In addition some proofs have been improved.

Commutative Algebra · Mathematics 2009-12-05 Werner M. Seiler

We prove a new formula for the generating function of multitype Cayley trees counted according to their degree distribution. Using this formula we recover and extend several enumerative results about trees. In particular, we extend some…

Combinatorics · Mathematics 2013-04-08 Olivier Bernardi , Alejandro H. Morales

Quadratic descent of hermitian and skew hermitian forms over division algebras with involution of the first kind in arbitrary characteristic is investigated and a criterion, in terms of systems of quadratic forms, is obtained. A refined…

Rings and Algebras · Mathematics 2020-02-26 Amir Hossein Nokhodkar

In a one-parameter model for evolution of random trees, which also includes the Barabasi-Albert random tree, almost sure behavior and the limiting distribution of the degree of a vertex in a fixed position are examined. Results about Polya…

Probability · Mathematics 2010-07-27 Agnes Backhausz

This work delves into the {\it quotient of an affine semigroup by a positive integer}, exploring its intricate properties and broader implications. We unveil an {\it associated tree} that serves as a valuable tool for further analysis.…

Commutative Algebra · Mathematics 2024-02-20 J. I. García-García , R. Tapia-Ramos , A. Vigneron-Tenorio

We study the asymptotic number of certain monotonically labeled increasing trees arising from a generalized evolution process. The main difference between the presented model and the classical model of binary increasing trees is that the…

Combinatorics · Mathematics 2019-10-30 Olivier Bodini , Antoine Genitrini , Bernhard Gittenberger , Stephan Wagner

One of the main virtues of trees is to represent formal solutions of various functional equations which can be cast in the form of fixed point problems. Basic examples include differential equations and functional (Lagrange) inversion in…

Combinatorics · Mathematics 2013-02-12 Florent Hivert , Jean-Christophe Novelli , Jean-Yves Thibon

The ongoing explosion of genome sequence data is transforming how we reconstruct and understand the histories of biological systems. Across biological scales, from individual cells to populations and species, trees-based models provide a…

Populations and Evolution · Quantitative Biology 2025-12-08 Yun Deng , Shing H. Zhan , Yulin Zhang , Chao Zhang , Bingjie Chen

A uniform recursive tree on $n$ vertices is a random tree where each possible $(n-1)!$ labeled recursive rooted tree is selected with equal probability. In this paper we introduce and study weighted trees, a non-uniform recursive tree model…

Probability · Mathematics 2017-12-12 Ella Hiesmayr , Ümit Işlak

We introduce tree representations for $ \alpha$-determinantal point processes. The $ \alpha$-determinantal point processes is introduced as a one parameter extension of the determinantal point process. In the previous paper with H.Osada,…

Probability · Mathematics 2019-12-25 Shota Osada