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Graph rewrite formalisms are a powerful approach to modeling complex molecular systems. They capture the intrinsic concurrency of molecular interactions, thereby enabling a formal notion of mechanism (a partially ordered set of events) that…

Logic in Computer Science · Computer Science 2019-01-04 Ioana Cristescu , Walter Fontana , Jean Krivine

We give a motivated introduction to the theory of perverse sheaves, culminating in the Decomposition Theorem of Beilinson, Bernstein, Deligne and Gabber. A goal of this survey is to show how the theory develops naturally from classical…

Algebraic Geometry · Mathematics 2009-04-16 Mark Andrea de Cataldo , Luca Migliorini

In this paper, we consider the convex, finite-sum minimization problem with explicit convex constraints over strongly connected directed graphs. The constraint is an intersection of several convex sets each being known to only one node. To…

Optimization and Control · Mathematics 2021-06-23 Firooz Shahriari-Mehr , David Bosch , Ashkan Panahi

We introduce and study so-called self-indexed graphs. These are (oriented) finite graphs endowed with a map from the set of edges to the set of vertices. Such graphs naturally arise from classical knot and link diagrams. In fact, the graphs…

Geometric Topology · Mathematics 2007-05-23 Matias Graña , Vladimir Turaev

We make use of the complex implicit representation in order to provide a deterministic algorithm for checking whether or not two implicit algebraic curves are related by a similarity, a central question in Pattern Recognition and Computer…

Algebraic Geometry · Mathematics 2015-05-25 Juan Gerardo Alcázar , Gema M. Diaz-Toca , Carlos Hermosa

V.I. Arnold [Russian Math. Surveys 26(2) (1971) 29-43] constructed a miniversal deformation of a square complex matrix under similarity; that is, a simple normal form to which not only a given square matrix A but all matrices B close to it…

Representation Theory · Mathematics 2014-01-21 A. Dmytryshyn , V. Futorny , V. V. Sergeichuk

We propose an efficient linear-time graph-based divisive cluster analysis approach called Reductive Clustering. The approach tries to reveal the hierarchical structural information through reducing the graph into a more concise one…

Artificial Intelligence · Computer Science 2020-09-28 Ching Tarn , Yinan Zhang , Ye Feng

We develop some aspects of a general theory of presentations of subshifts by labelled directed graphs, in particular by compact graphs. Also considered are synchronization properties of subshifts that lead to presentations by countable…

Dynamical Systems · Mathematics 2012-09-11 Wolfgang Krieger

In this article, we discuss formal invariants of singularly-perturbed linear differential systems in neighborhood of turning points and give algorithms which allow their computation. The algorithms proposed are implemented in the computer…

Classical Analysis and ODEs · Mathematics 2016-12-15 Moulay A. Barkatou , Suzy S. Maddah

While deep convolutional architectures have achieved remarkable results in a gamut of supervised applications dealing with images and speech, recent works show that deep untrained non-convolutional architectures can also outperform…

Signal Processing · Electrical Eng. & Systems 2020-03-13 Samuel Rey , Antonio G. Marques , Santiago Segarra

Let X be a projective, equidimensional, singular scheme over an algebraically closed field. Then the existence of a geometric smoothing (i.e. a family of deformations of X over a smooth base curve whose generic fibre is smooth) implies the…

Algebraic Geometry · Mathematics 2023-02-15 Alessandro Nobile

It is known that isomorphisms of graph Jacobians induce cyclic bijections on the associated graphs. We characterize when such cyclic bijections can be strengthened to graph isomorphisms, in terms of an easily computed divisor. The result…

Combinatorics · Mathematics 2023-07-25 Sarah Griffith

In a bidirected graph an edge has a direction at each end, so bidirected graphs generalize directed graphs. We generalize the definitions of transitive closure and transitive reduction from directed graphs to bidirected graphs by…

Combinatorics · Mathematics 2021-06-16 Ouahiba Bessouf , Abdelkader Khelladi , Thomas Zaslavsky

In this expository article we introduce a diagrammatic scheme to represent reverse classes of weights and some of their properties.

Analysis of PDEs · Mathematics 2014-01-14 Sapto Indratno , Diego Maldonado , Sharad Silwal

In this work we study how some elementary graph operations (like the disjoint union) and the collapse of two vertices modify the cut ideal of a graph. They pave the way for reducing the cut ideal of every graph to the cut ideal of smaller…

Combinatorics · Mathematics 2012-02-09 Ivan Martino

We introduce a unified framework based on bi-level optimization schemes to deal with parameter learning in the context of image processing. The goal is to identify the optimal regularizer within a family depending on a parameter in a…

Analysis of PDEs · Mathematics 2022-09-15 Elisa Davoli , Rita Ferreira , Carolin Kreisbeck , Hidde Schönberger

In this article, the cyclic homology theory of formal deformation quantizations of the convolution algebra associated to a proper etale Lie groupoid is studied. We compute the Hochschild cohomology of the convolution algebra and express it…

K-Theory and Homology · Mathematics 2007-05-23 Nikolai Neumaier , Markus J. Pflaum , Hessel Posthuma , Xiang Tang

In the context of linear inverse problems, we propose and study a general iterative regularization method allowing to consider large classes of regularizers and data-fit terms. The algorithm we propose is based on a primal-dual diagonal…

Optimization and Control · Mathematics 2017-08-04 Guillaume Garrigos , Lorenzo Rosasco , Silvia Villa

The modelling of discrete regulatory networks combines a graph specifying the pairwise influences between the variables of the system, and a parametrisation from which can be derived a discrete transition system. Given the influence graph…

Discrete Mathematics · Computer Science 2018-03-19 Juraj Kolčák , David Šafránek , Stefan Haar , Loïc Paulevé

We introduce a new class of graph transformation systems in which rewrite rules can be guarded by universally quantified conditions on the neighbourhood of nodes. These conditions are defined via special graph patterns which may be…

Logic in Computer Science · Computer Science 2014-07-21 Giorgio Delzanno , Jan Stückrath