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We present an automatic method for joint liver lesion segmentation and classification using a hierarchical fine-tuning framework. Our dataset is small, containing 332 2-D CT examinations with lesion annotated into 3 lesion types: cysts,…

Image and Video Processing · Electrical Eng. & Systems 2019-08-01 Michal Heker , Avi Ben-Cohen , Hayit Greenspan

Persistent Homology is a fairly new branch of Computational Topology which combines geometry and topology for an effective shape description of use in Pattern Recognition. In particular it registers through "Betti Numbers" the presence of…

Quantitative Methods · Quantitative Biology 2016-06-01 Massimo Ferri , Ivan Tomba , Andrea Visotti , Ignazio Stanganelli

Transfer learning and joint learning approaches are extensively used to improve the performance of Convolutional Neural Networks (CNNs). In medical imaging applications in which the target dataset is typically very small, transfer learning…

Image and Video Processing · Electrical Eng. & Systems 2020-05-26 Michal Heker , Hayit Greenspan

Automatic liver lesion segmentation is a challenging task while having a significant impact on assisting medical professionals in the designing of effective treatment and planning proper care. In this paper we propose a cascaded system that…

Image and Video Processing · Electrical Eng. & Systems 2020-05-26 Raunak Dey , Yi Hong

We propose a fully-automated method for accurate and robust detection and segmentation of potentially cancerous lesions found in the liver and in lymph nodes. The process is performed in three steps, including organ detection, lesion…

Computer Vision and Pattern Recognition · Computer Science 2017-03-21 Assaf Hoogi , John W. Lambert , Yefeng Zheng , Dorin Comaniciu , Daniel L. Rubin

We propose a model for the joint segmentation of the liver and liver lesions in computed tomography (CT) volumes. We build the model from two fully convolutional networks, connected in tandem and trained together end-to-end. We evaluate our…

Computer Vision and Pattern Recognition · Computer Science 2018-08-14 Eugene Vorontsov , An Tang , Chris Pal , Samuel Kadoury

Diagnosis of pulmonary lesions from computed tomography (CT) is important but challenging for clinical decision making in lung cancer related diseases. Deep learning has achieved great success in computer aided diagnosis (CADx) area for…

Image and Video Processing · Electrical Eng. & Systems 2020-10-09 Jiancheng Yang , Mingze Gao , Kaiming Kuang , Bingbing Ni , Yunlang She , Dong Xie , Chang Chen

Multiparameter persistent homology has been largely neglected as an input to machine learning algorithms. We consider the use of lattice-based convolutional neural network layers as a tool for the analysis of features arising from…

Algebraic Topology · Mathematics 2022-09-01 Hans Riess , Jakob Hansen , Robert Ghrist

Deep learning-based segmentation of the liver and hepatic lesions therein steadily gains relevance in clinical practice due to the increasing incidence of liver cancer each year. Whereas various network variants with overall promising…

Image and Video Processing · Electrical Eng. & Systems 2023-03-23 Georg Hille , Shubham Agrawal , Pavan Tummala , Christian Wybranski , Maciej Pech , Alexey Surov , Sylvia Saalfeld

Liver cancer has high morbidity and mortality rates in the world. Multi-phase CT is a main medical imaging modality for detecting/identifying and diagnosing liver tumors. Automatically detecting and classifying liver lesions in CT images…

Image and Video Processing · Electrical Eng. & Systems 2023-06-29 Fakai Wang , Chi-Tung Cheng , Chien-Wei Peng , Ke Yan , Min Wu , Le Lu , Chien-Hung Liao , Ling Zhang

We propose a computationally efficient architecture that learns to segment lesions from CT images of the liver. The proposed architecture uses bilinear interpolation with sub-pixel convolution at the last layer to upscale the course feature…

Computer Vision and Pattern Recognition · Computer Science 2018-05-24 Ram Krishna Pandey , Aswin Vasan , A G Ramakrishnan

Automatic detection of liver lesions in CT images poses a great challenge for researchers. In this work we present a deep learning approach that models explicitly the variability within the non-lesion class, based on prior knowledge of the…

Computer Vision and Pattern Recognition · Computer Science 2017-07-21 Maayan Frid-Adar , Idit Diamant , Eyal Klang , Michal Amitai , Jacob Goldberger , Hayit Greenspan

Skin cancer is one of the most common cancers in the United States. As technological advancements are made, algorithmic diagnosis of skin lesions is becoming more important. In this paper, we develop algorithms for segmenting the actual…

Computer Vision and Pattern Recognition · Computer Science 2019-05-22 Yu-Min Chung , Chuan-Shen Hu , Austin Lawson , Clifford Smyth

An Important tool in the field topological data analysis is known as persistent Homology (PH) which is used to encode abstract representation of the homology of data at different resolutions in the form of persistence diagram (PD). In this…

Image and Video Processing · Electrical Eng. & Systems 2022-07-13 Aras Asaad , Dashti Ali , Taban Majeed , Rasber Rashid

For a medical diagnosis, health professionals use different kinds of pathological ways to make a decision for medical reports in terms of patients medical condition. In the modern era, because of the advantage of computers and technologies,…

Machine Learning · Statistics 2021-06-08 Fahad B. Mostafa , Md Easin Hasan

Objectives: to propose a fully-automatic computer-aided diagnosis (CAD) solution for liver lesion characterization, with uncertainty estimation. Methods: we enrolled 400 patients who had either liver resection or a biopsy and was diagnosed…

Image and Video Processing · Electrical Eng. & Systems 2021-10-19 Peng Wang , Yuhsuan Wu , Bolin Lai , Xiao-Yun Zhou , Le Lu , Wendi Liu , Huabang Zhou , Lingyun Huang , Jing Xiao , Adam P. Harrison , Ningyang Jia , Heping Hu

Colorectal liver metastasis is one of most aggressive liver malignancies. While the definition of lesion type based on CT images determines the diagnosis and therapeutic strategy, the discrimination between cancerous and non-cancerous…

Computer Vision and Pattern Recognition · Computer Science 2019-01-29 Francisco Perdigon Romero , Andre Diler , Gabriel Bisson-Gregoire , Simon Turcotte , Real Lapointe , Franck Vandenbroucke-Menu , An Tang , Samuel Kadoury

Globally, chronic liver disease continues to be a major health concern that requires precise predictive models for prompt detection and treatment. Using the Indian Liver Patient Dataset (ILPD) from the University of California at Irvine's…

Machine Learning · Computer Science 2024-12-31 Anand Karna , Naina Khan , Rahul Rauniyar , Prashant Giridhar Shambharkar

In practice, many medical datasets have an underlying taxonomy defined over the disease label space. However, existing classification algorithms for medical diagnoses often assume semantically independent labels. In this study, we aim to…

Computer Vision and Pattern Recognition · Computer Science 2022-09-14 Zhen Yu , Toan Nguyen , Yaniv Gal , Lie Ju , Shekhar S. Chandra , Lei Zhang , Paul Bonnington , Victoria Mar , Zhiyong Wang , Zongyuan Ge

A fully automatic technique for segmenting the liver and localizing its unhealthy tissues is a convenient tool in order to diagnose hepatic diseases and assess the response to the according treatments. In this work we propose a method to…

Computer Vision and Pattern Recognition · Computer Science 2017-12-01 Miriam Bellver , Kevis-Kokitsi Maninis , Jordi Pont-Tuset , Xavier Giro-i-Nieto , Jordi Torres , Luc Van Gool
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