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Specialized documentation techniques have been developed to communicate key facts about machine-learning (ML) systems and the datasets and models they rely on. Techniques such as Datasheets, FactSheets, and Model Cards have taken a mainly…

This work in progress aims to provide a unified introduction to statistical learning, building up slowly from classical models like the GMM and HMM to modern neural networks like the VAE and diffusion models. There are today many internet…

Machine Learning · Computer Science 2025-07-31 Joseph G. Makin

Breaking down a problem into intermediate steps has demonstrated impressive performance in Large Language Model (LLM) reasoning. However, the growth of the reasoning chain introduces uncertainty and error accumulation, making it challenging…

Computation and Language · Computer Science 2023-10-27 Yuxi Xie , Kenji Kawaguchi , Yiran Zhao , Xu Zhao , Min-Yen Kan , Junxian He , Qizhe Xie

Spatio-Temporal (ST) data science, which includes sensing, managing, and mining large-scale data across space and time, is fundamental to understanding complex systems in domains such as urban computing, climate science, and intelligent…

Databases · Computer Science 2025-03-19 Yuxuan Liang , Haomin Wen , Yutong Xia , Ming Jin , Bin Yang , Flora Salim , Qingsong Wen , Shirui Pan , Gao Cong

Interpretive scholars generate knowledge from text corpora by manually sampling documents, applying codes, and refining and collating codes into categories until meaningful themes emerge. Given a large corpus, machine learning could help…

Human-Computer Interaction · Computer Science 2022-08-15 Matt-Heun Hong , Lauren A. Marsh , Jessica L. Feuston , Janet Ruppert , Jed R. Brubaker , Danielle Albers Szafir

As data science and machine learning methods are taking on an increasingly important role in the materials research community, there is a need for the development of machine learning software tools that are easy to use (even for nonexperts…

Computational Physics · Physics 2020-06-26 Ryan Jacobs , Tam Mayeshiba , Ben Afflerbach , Luke Miles , Max Williams , Matthew Turner , Raphael Finkel , Dane Morgan

Algorithmic classification of research publications has been created to study different aspects of research. Such classifications can be used to support information needs in universities for decision making. However, the classifications…

Digital Libraries · Computer Science 2022-06-23 Peter Sjögårde

Development and homeostasis in multicellular systems both require exquisite control over spatial molecular pattern formation and maintenance. Advances in spatially-resolved and high-throughput molecular imaging methods such as multiplexed…

Quantitative Methods · Quantitative Biology 2023-03-30 Alex J. Lee , Robert Cahill , Reza Abbasi-Asl

State machine formalisms equipped with hierarchy and parallelism allow to compactly model complex system behaviours. Such models can then be transformed into executable code or inputs for model-based testing and verification techniques.…

Software Engineering · Computer Science 2017-10-24 Xavier Devroey , Gilles Perrouin , Maxime Cordy , Axel Legay , Pierre-Yves Schobbens , Patrick Heymans

It has been found that stochastic algorithms often find good solutions much more rapidly than inherently-batch approaches. Indeed, a very useful rule of thumb is that often, when solving a machine learning problem, an iterative technique…

Machine Learning · Computer Science 2013-08-19 Andrew Cotter

Visual document understanding (VDU) is a challenging task that involves understanding documents across various modalities (text and image) and layouts (forms, tables, etc.). This study aims to enhance generalizability of small VDU models by…

Computer Vision and Pattern Recognition · Computer Science 2024-10-07 Sungnyun Kim , Haofu Liao , Srikar Appalaraju , Peng Tang , Zhuowen Tu , Ravi Kumar Satzoda , R. Manmatha , Vijay Mahadevan , Stefano Soatto

Many disciplines pose natural-language research questions over large document collections whose answers typically require structured evidence, traditionally obtained by manually designing an annotation schema and exhaustively labeling the…

Computation and Language · Computer Science 2026-04-13 Shahar Levy , Eliya Habba , Reshef Mintz , Barak Raveh , Renana Keydar , Gabriel Stanovsky

A systematic literature review (SLR) is a methodology used to find and aggregate all relevant existing evidence about a specific research question of interest. Important decisions need to be made at several points in the review process,…

Software Engineering · Computer Science 2020-12-22 Katia R. Felizardo , Stephen G. MacDonell , Emília Mendes , José Carlos Maldonado

The digitalisation of research requires data management systems capable of supporting a broad spectrum of usage scenarios, ranging from document-oriented repositories to fully factographic environments. This paper introduces a…

Digital Libraries · Computer Science 2025-10-22 Victor Dudarev , Alfred Ludwig

Document layout understanding is a field of study that analyzes the spatial arrangement of information in a document hoping to understand its structure and layout. Models such as LayoutLM (and its subsequent iterations) can understand…

Computation and Language · Computer Science 2025-01-13 Pablo Melendez , Clemens Havas

Combining clinical and omics data can improve both daily clinical routines and research to gain more insights into complex medical procedures. We present the results of our first phase in a multi-year collaboration with analysts and…

Human-Computer Interaction · Computer Science 2023-09-25 Markus Höhn , Hendrik Lücke-Tieke , Jan Burmeister , Jörn Kohlhammer

Works in quantum machine learning (QML) over the past few years indicate that QML algorithms can function just as well as their classical counterparts, and even outperform them in some cases. Among the corpus of recent work, many current…

Machine Learning · Computer Science 2023-05-18 Joseph Lindsay , Ramtin Zand

Identifying the main contributions related to the Automated Test Production (ATP) of Computer Programs and providing an overview about models, methodologies and tools used for this purpose is the aim of this Systematic Literature Review…

Software Engineering · Computer Science 2024-01-05 José Marcos Gomes , Luis Alberto Vieira Dias

This chapter provides a brief introduction to the theory and practice of spatial stochastic simulations. It begins with an overview of different methods available for biochemical simulations highlighting their strengths and limitations.…

Quantitative Methods · Quantitative Biology 2018-10-02 Sanjana Gupta , Jacob Czech , Robert Kuczewski , Thomas M. Bartol , Terrence J. Sejnowski , Robin E. C. Lee , James R. Faeder

Leaderboards are crucial in the machine learning (ML) domain for benchmarking and tracking progress. However, creating leaderboards traditionally demands significant manual effort. In recent years, efforts have been made to automate…

Machine Learning · Computer Science 2026-02-02 Roelien C. Timmer , Necva Bölücü , Stephen Wan