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In this paper, we revisit the much studied problem of Pattern Matching with Swaps (Swap Matching problem, for short). We first present a graph-theoretic model, which opens a new and so far unexplored avenue to solve the problem. Then, using…

Data Structures and Algorithms · Computer Science 2013-09-19 Pritom Ahmed , Costas S. Iliopoulos , A. S. M. Sohidull Islam , M. Sohel Rahman

We study the complexity of the problem of searching for a set of patterns that separate two given sets of strings. This problem has applications in a wide variety of areas, most notably in data mining, computational biology, and in…

Computational Complexity · Computer Science 2016-12-20 Giuseppe Lancia , Luke Mathieson , Pablo Moscato

It has been shown in the indexing literature that there is an essential difference between prefix/range searches on the one hand, and predecessor/rank searches on the other hand, in that the former provably allows faster query resolution.…

Data Structures and Algorithms · Computer Science 2018-04-16 Djamal Belazzougui , Paolo Boldi , Rasmus Pagh , Sebastiano Vigna

Regular expression matching is essential for many applications, such as finding patterns in text, exploring substrings in large DNA sequences, or lexical analysis. However, sequential regular expression matching may be time-prohibitive for…

Formal Languages and Automata Theory · Computer Science 2015-06-30 Suejb Memeti , Sabri Pllana

We present a novel architecture for sparse pattern processing, using flash storage with embedded accelerators. Sparse pattern processing on large data sets is the essence of applications such as document search, natural language processing,…

Hardware Architecture · Computer Science 2017-01-25 Sang-Woo Jun , Huy T. Nguyen , Vijay N. Gadepally , Arvind

String matching is the problem of finding all the occurrences of a pattern in a text. It has been intensively studied and the Boyer-Moore string matching algorithm is probably one of the most famous solution to this problem. This algorithm…

Data Structures and Algorithms · Computer Science 2024-02-27 Thierry Lecroq

String matching algorithm plays the vital role in the Computational Biology. The functional and structural relationship of the biological sequence is determined by similarities on that sequence. For that, the researcher is supposed to aware…

Data Structures and Algorithms · Computer Science 2014-01-30 Pandiselvam. P , Marimuthu. T , Lawrance. R

Large-alphabet strings are common in scenarios such as information retrieval and natural-language processing. The efficient storage and processing of such strings usually introduces several challenges that are not witnessed in…

Data Structures and Algorithms · Computer Science 2024-05-03 Diego Arroyuelo , Gabriel Carmona , Héctor Larrañaga , Francisco Riveros , Carlos Eugenio Rojas-Morales , Erick Sepúlveda

Given a text and a pattern over an alphabet, the pattern matching problem searches for all occurrences of the pattern in the text. An equivalence relation $\approx$ is called a substring consistent equivalence relation (SCER), if for two…

Data Structures and Algorithms · Computer Science 2022-07-28 Davaajav Jargalsaikhan , Diptarama Hendrian , Ryo Yoshinaka , Ayumi Shinohara

The timed pattern matching problem is an actively studied topic because of its relevance in monitoring of real-time systems. There one is given a log $w$ and a specification $\mathcal{A}$ (given by a timed word and a timed automaton in this…

Formal Languages and Automata Theory · Computer Science 2018-10-22 Masaki Waga , Ichiro Hasuo , Kohei Suenaga

The dictionary matching problem is to locate occurrences of any pattern among a set of patterns in a given text. Massive data sets abound and at the same time, there are many settings in which working space is extremely limited. We…

Data Structures and Algorithms · Computer Science 2013-01-29 Shoshana Marcus Dina Sokol

This paper evaluates existing and newly proposed answer selection methods based on pre-trained word embeddings. Word embeddings are highly effective in various natural language processing tasks and their integration into traditional…

Information Retrieval · Computer Science 2017-08-16 Rishav Chakravarti , Jiri Navratil , Cicero Nogueira dos Santos

Given a string $S$ over an alphabet $\Sigma$, the 'string indexing problem' is to preprocess $S$ to subsequently support efficient pattern matching queries, i.e., given a pattern string $P$ report all the occurrences of $P$ in $S$. In this…

Data Structures and Algorithms · Computer Science 2023-01-24 Philip Bille , Johannes Fischer , Inge Li Gørtz , Max Rishøj Pedersen , Tord Joakim Stordalen

Many tasks in natural language processing, ranging from machine translation to question answering, can be reduced to the problem of matching two sentences or more generally two short texts. We propose a new approach to the problem, called…

Computation and Language · Computer Science 2015-06-15 Mingxuan Wang , Zhengdong Lu , Hang Li , Qun Liu

In this paper, we consider the problem of identifying patterns of interest in colored strings. A colored string is a string where each position is assigned one of a finite set of colors. Our task is to find substrings of the colored string…

Data Structures and Algorithms · Computer Science 2024-04-16 Zsuzsanna Lipták , Simon J. Puglisi , Massimiliano Rossi

The classical pattern matching asks for locating all occurrences of one string, called the pattern, in another, called the text, where a string is simply a sequence of characters. Due to the potential practical applications, it is desirable…

Data Structures and Algorithms · Computer Science 2024-10-30 Jonas Ellert , Paweł Gawrychowski , Adam Górkiewicz , Tatiana Starikovskaya

We propose a new indexing structure for parameterized strings, called parameterized position heap. Parameterized position heap is applicable for parameterized pattern matching problem, where the pattern matches a substring of the text if…

Data Structures and Algorithms · Computer Science 2017-04-19 Diptarama , Takashi Katsura , Yuhei Otomo , Kazuyuki Narisawa , Ayumi Shinohara

To index the increasing volume of data, modern data indexes are typically stored on SSDs and cached in DRAM. However, searching such an index has resulted in significant I/O traffic due to limited access locality and inefficient cache…

Hardware Architecture · Computer Science 2024-08-05 Yun-Chih Chen , Yuan-Hao Chang , Tei-Wei Kuo

Given a string $S$ of length $n$, the classic string indexing problem is to preprocess $S$ into a compact data structure that supports efficient subsequent pattern queries. In the \emph{deterministic} variant the goal is to solve the string…

Data Structures and Algorithms · Computer Science 2016-12-07 Philip Bille , Inge Li Gørtz , Frederik Rye Skjoldjensen

This paper develops a model that addresses sentence embedding, a hot topic in current natural language processing research, using recurrent neural networks with Long Short-Term Memory (LSTM) cells. Due to its ability to capture long term…

Computation and Language · Computer Science 2016-11-18 Hamid Palangi , Li Deng , Yelong Shen , Jianfeng Gao , Xiaodong He , Jianshu Chen , Xinying Song , Rabab Ward