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This article outlines sufficient conditions under which a one-dimensional chain of identical nonlinear oscillators can display complex spatio-temporal behavior. The units are described by phase equations and consist of excitable…

Chaotic Dynamics · Physics 2017-06-08 Leandro M. Alonso

Electrical stimulation of neural systems is a key tool for understanding neural dynamics and ultimately for developing clinical treatments. Many applications of electrical stimulation affect large populations of neurons. However,…

Neurons and Cognition · Quantitative Biology 2020-11-18 Caglar Cakan , Klaus Obermayer

This work gives a mathematical foundation for bifurcation from a stable equilibrium in the genome. We construct idealized dynamics associated with the genome. For this dynamics we investigate the two main bifurcations from a stable…

Dynamical Systems · Mathematics 2016-04-28 Indika Rajapakse , Steve Smale

We model spontaneous cortical activity with a network of coupled spiking units, in which multiple spatio-temporal patterns are stored as dynamical attractors. We introduce an order parameter, which measures the overlap (similarity) between…

Neurons and Cognition · Quantitative Biology 2015-06-17 Silvia Scarpetta , Antonio de Candia

Cells often exhibit different and stable phenotypes from the same DNA sequence. Robustness and plasticity of such cellular states are controlled by diverse transcriptional and epigenetic mechanisms, among them the modification of…

Molecular Networks · Quantitative Biology 2015-06-18 Daniel Jost

We study collective dynamics of complex networks of stochastic excitable elements, active rotators. In the thermodynamic limit of infinite number of elements, we apply a mean-field theory for the network and then use a Gaussian…

Chaotic Dynamics · Physics 2013-11-19 Bernard Sonnenschein , Michael A. Zaks , Alexander B. Neiman , Lutz Schimansky-Geier

The oddball paradigm is widely applied to the investigation of multiple cognitive functions. Prior studies have explored the cortical oscillation and power spectral differing from the resting-state conduction to oddball paradigm, but…

Signal Processing · Electrical Eng. & Systems 2020-01-14 Fali Li , Chanlin Yi , Yuanyuan Liao , Yuanling Jiang , Yajing Si , Limeng Song , Tao Zhang , Dezhong Yao , Yangsong Zhang , Zehong Cao , Peng Xu

We show that individual vibrational modes in single-molecule junctions with asymmetric molecule-lead coupling can be selectively excited by applying an external bias voltage. Thereby, a non-statistical distribution of vibrational energy can…

Mesoscale and Nanoscale Physics · Physics 2017-09-13 R. Volkovich , R. Härtle , M. Thoss , U. Peskin

We present recent results on noise-induced transitions in a nonlinear oscillator with randomly modulated frequency. The presence of stochastic perturbations drastically alters the dynamical behaviour of the oscillator: noise can wash out a…

Chaotic Dynamics · Physics 2009-11-13 Sebastien Aumaitre , Francois Petrelis , Kirone Mallick

Modeling and parameter estimation for neuronal dynamics are often challenging because many parameters can range over orders of magnitude and are difficult to measure experimentally. Moreover, selecting a suitable model complexity requires a…

Dynamical Systems · Mathematics 2018-01-31 J. E. Rubin , B. Krauskopf , H. M. Osinga

The specific connectivity of a neuronal network is reflected in the dynamics of the signals recorded on its nodes. The analysis of how the activity in one node predicts the behaviour of another gives the directionality in their…

Quantitative Methods · Quantitative Biology 2019-11-21 Víctor J. López-Madrona , Fernanda Matias , Claudio Mirasso , Santiago Canals , Ernesto Pereda

We theoretically describe how weak signals may be efficiently transmitted throughout more than one frequency range in noisy excitable media by kind of stochastic multiresonance. This serves us here to reinterpret recent experiments in…

Data Analysis, Statistics and Probability · Physics 2015-05-27 J. J. Torres , J. Marro , J. F. Mejias

The brain's functional connectivity fluctuates over time instead of remaining steady in a stationary mode even during the resting state. This fluctuation establishes the dynamical functional connectivity that transitions in a non-random…

Neurons and Cognition · Quantitative Biology 2022-03-28 Shikuang Deng , Jingwei Li , B. T. Thomas Yeo , Shi Gu

Certain cellular processes take the form of activity pulses that can be interpreted in terms of noise-driven excitable dynamics. Here we present an overview of different gene circuit architectures that exhibit excitable pulses of protein…

Molecular Networks · Quantitative Biology 2011-04-22 Pau Rué , Jordi Garcia-Ojalvo

We study the versatile performance of networks of coupled circuits. Each of these circuits is composed of a positive and a negative feedback loop in a motif that is frequently found in genetic and neural networks. When two of these circuits…

Adaptation and Self-Organizing Systems · Physics 2015-06-22 Darka Labavić , Hildegard Meyer-Ortmanns

We investigate the modes of oscillation of heterogeneous ring-networks of quadratic integrate-and-fire neurons with non-local, space-dependent coupling. Perturbations of the equilibrium state with a particular wave number produce transient…

Neurons and Cognition · Quantitative Biology 2017-11-15 Jose M. Esnaola-Acebes , Alex Roxin , Daniele Avitabile , Ernest Montbrió

Spiking neural networks drawing inspiration from biological constraints of the brain promise an energy-efficient paradigm for artificial intelligence. However, challenges exist in identifying guiding principles to train these networks in a…

Neural and Evolutionary Computing · Computer Science 2024-04-25 Joseph A. Kilgore , Jeffrey D. Kopsick , Giorgio A. Ascoli , Gina C. Adam

In networked systems, the interplay between the dynamics of individual subsystems and their network interactions has been found to generate multistability in various contexts. Despite its ubiquity, the specific mechanisms and ingredients…

Dynamical Systems · Mathematics 2024-11-22 Kalel L. Rossi , Everton S. Medeiros , Peter Ashwin , Ulrike Feudel

Differential equation-based physiological models of sleep-wake networks describe sleep-wake regulation by simulating the activity of wake- and sleep-promoting neuronal populations and the modulation of these populations by homeostatic and…

Dynamical Systems · Mathematics 2021-11-16 Christina Athanasouli , Sofia H. Piltz , Cecilia Diniz Behn , Victoria Booth

Epilepsy is one of the most common neurological disorders globally, affecting millions of individuals. Despite significant advancements, the precise mechanisms underlying this condition remain largely unknown, making accurately predicting…

Systems and Control · Electrical Eng. & Systems 2024-04-05 Yuzhen Qin , Ahmed El-Gazzar , Danielle S. Bassett , Fabio Pasqualetti , Marcel van Gerven