Related papers: On Cyclic DNA Codes
This paper presents some basic theorems giving the structure of cyclic codes of length n over the ring of integers modulo p^a and over the p-adic numbers, where p is a prime not dividing n. An especially interesting example is the 2-adic…
In this paper we study a special type of quasi-cyclic (QC) codes called skew QC codes. This set of codes is constructed using a non-commutative ring called the skew polynomial rings $F[x;\theta ]$. After a brief description of the skew…
The genetic code is connection between 64 codons, which are building blocks of the genes, and 20 amino acids, which are building blocks of the proteins. In addition to coding amino acids, a few codons code stop signal, which is at the end…
A characterization of a class of optimal three-weight cyclic codes of dimension 3 over any finite field was recently presented in [10]. Shortly after this, a generalization for the sufficient numerical conditions of such characterization…
This study aims to determine the algebraic structures of $\alpha$-constacyclic codes of length $3p^s$ over the finite commutative non-chain ring $\mathcal{R}=\frac{\mathbb{F}_{p^m}[u, v]}{\langle u^2, v^2, uv-vu\rangle}$, for a prime $p…
Constant dimension codes are subsets of the finite Grassmann variety. The study of these codes is a central topic in random linear network coding theory. Orbit codes represent a subclass of constant dimension codes. They are defined as…
Polycyclic codes offer a natural generalization of cyclic codes and provide a broader algebraic framework for constructing linear codes with good parameters. In this paper, we study binary polycyclic codes associated with powers of…
Generalized Bicycle (GB) codes offer a compelling alternative to surface codes for quantum error correction. This paper focuses on (2,2)-Generalized Bicycle codes, constructed from pairs of binary circulant matrices with two non-zero…
For units $\delta$ and $\alpha$ in $\F_{p^m}$, the structure of $(\delta+\alpha u^2)$-constacyclic codes of length $p^k$ over $\mathbb{F}_{p^m}+u\mathbb{F}_{p^m}+u^2\mathbb{F}_{p^m}$ is studied and self-dual $(\delta+\alpha…
Reed-Solomon (RS) codes are constructed over a finite field that have been widely employed in storage and communication systems. Many fast encoding/decoding algorithms such as fast Fourier transform (FFT) and modular approach are designed…
A new approach to bound the minimum distance of $q$-ary cyclic codes is presented. The connection to the BCH and the Hartmann--Tzeng bound is formulated and it is shown that for several cases an improvement is achieved. We associate a…
We have developed a generalized semi-analytic approach for efficiently computing cyclization and looping $J$ factors of DNA under arbitrary binding constraints. Many biological systems involving DNA-protein interactions impose precise…
Linear codes and $t$-designs are interactive with each other. It is well known that some $t$-designs have been constructed by using certain linear codes in recent years. However, only a small number of infinite families of the extended…
There is a one-to-one correspondence between $\ell$-quasi-cyclic codes over a finite field $\mathbb F_q$ and linear codes over a ring $R = \mathbb F_q[Y]/(Y^m-1)$. Using this correspondence, we prove that every $\ell$-quasi-cyclic self-dual…
The biggest challenge when using DNA as a storage medium is maintaining its stability. The relative occurrence of Guanine (G) and Cytosine (C) is essential for the longevity of DNA. In addition to that, reverse complementary base pairs…
The structure of multivariate semisimple codes over a finite chain ring $R$ is established using the structure of the residue field $\bar R$. Multivariate codes extend in a natural way the univariate cyclic and negacyclic codes and include…
A Z2Z4-additive code C is called cyclic if the set of coordinates can be partitioned into two subsets, the set of Z_2 and the set of Z_4 coordinates, such that any cyclic shift of the coordinates of both subsets leaves the code invariant.…
We report a theoretical study of DNA flexibility and quantitatively predict the ring closure probability as a function of DNA contour length. Recent experimental studies show that the flexibility of short DNA fragments (as compared to the…
In network coding a constant dimension code consists of a set of k-dimensional subspaces of F_q^n. Orbit codes are constant dimension codes which are defined as orbits of a subgroup of the general linear group, acting on the set of all…
Let $R=\mathbb{F}_{2^{m}}+u\mathbb{F}_{2^{m}}+\cdots+u^{k}\mathbb{F}_{2^{m}}$ , where $\mathbb{F}_{2^{m}}$ is a finite field with $2^{m}$ elements, $m$ is a positive integer, $u$ is an indeterminate with $u^{k+1}=0.$ In this paper, we…