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We consider steady states of dynamics that have an underlying network structure. We study how a steady state responds to small perturbations in the network parameters and how this sensitivity is connected to the network structure. We…

Molecular Networks · Quantitative Biology 2023-03-20 Robin Chemnitz

Undirected graphical models are widely used in statistics, physics and machine vision. However Bayesian parameter estimation for undirected models is extremely challenging, since evaluation of the posterior typically involves the…

Computation · Statistics 2012-03-19 Richard G. Everitt

To determine the effect of nonradiative excitation energy transfer on the fluorescence of a rigid multicomponent solution, a new analytical method was developed by treating this transfer as a time-resolved Markov chain (TRMC). In the TRMC…

Chemical Physics · Physics 2025-09-16 Józef Kuśba

Markov chains are one of the well-known tools for modeling and analyzing stochastic systems. At the same time, they are used for constructing random walks that can achieve a given stationary distribution. This paper is concerned with…

Information Theory · Computer Science 2025-01-07 Saber Jafarizadeh

Finite order invariants (Vassiliev invariants) of knots are expressed in terms of weight systems, that is, functions on chord diagrams satisfying the four-term relations. Weight systems have graph analogues, so-called $4$-invariants of…

Combinatorics · Mathematics 2018-06-01 V. I. Zhukov

A polynomial-time exact algorithm for counting the number of directed acyclic graphs in a Markov equivalence class was recently given by Wien\"obst, Bannach, and Li\'skiewicz (AAAI 2021). In this paper, we consider the more general problem…

Data Structures and Algorithms · Computer Science 2023-06-14 Vidya Sagar Sharma

Analogously to the quantum case considered in Cruz-de-la-Rosa and Guerrero-Poblete (Open Syst. Inf. Dyn. 32, 2550005, 2025), this work proposes a graph-theoretic approach to studying non-equilibrium properties in Markov chains. We prove…

Probability · Mathematics 2026-03-05 Marco Antonio Cruz-de-la-Rosa , Fernando Guerrero-Poblete

This is a significantly expanded version of the survey paper "Mixing and decay of correlations in non-uniformly expanding maps: a survey of recent results" math/0301319. We discuss recent results on decay of correlations for non-uniformly…

Dynamical Systems · Mathematics 2007-05-23 Stefano Luzzatto

We generate new mathematical tools with which to quantify the macroscopic topological structure of large directed networks. This is achieved via a statistical mechanical analysis of constrained maximum entropy ensembles of directed random…

Quantitative Methods · Quantitative Biology 2015-05-27 E. S. Roberts , A. C. C. Coolen , T. Schlitt

We generalize the thermodynamic uncertainty relation, providing an entropic upper bound for average fluxes in time-continuous steady-state systems (Gingrich et al., Phys. Rev. Lett. 116, 120601 (2016)), to time-discrete Markov chains and to…

Statistical Mechanics · Physics 2017-10-11 Karel Proesmans , Christian Van den Broeck

Lower bounds on fluctuations of thermodynamic currents depend on the nature of time: discrete or continuous. To understand the physical reason, we compare current fluctuations in discrete-time Markov chains and continuous-time master…

Statistical Mechanics · Physics 2018-03-21 Davide Chiuchiù , Simone Pigolotti

Tension-continuous (shortly TT) mappings are mappings between the edge sets of graphs. They generalize graph homomorphisms. From another perspective, tension-continuous mappings are dual to the notion of flow-continuous mappings and the…

Combinatorics · Mathematics 2007-05-23 Jaroslav Nesetril , Robert Samal

In this work we study the asymptotic of renewal sequences associated with certain transient renewal Markov chains and enquire about the existence of limit laws in this set up.

Probability · Mathematics 2017-01-05 Dalia Terhesiu

We study Markov chains for $\alpha$-orientations of plane graphs, these are orientations where the outdegree of each vertex is prescribed by the value of a given function $\alpha$. The set of $\alpha$-orientations of a plane graph has a…

Combinatorics · Mathematics 2023-06-22 Stefan Felsner , Daniel Heldt

Many applications in networked control require intermittent access of a controller to a system, as in event-triggered systems or information constrained control applications. Motivated by such applications and extending previous work on…

Probability · Mathematics 2015-04-30 Ramiro Zurkowski , Serdar Yüksel , Tamás Linder

A graphical model provides a compact and efficient representation of the association structure of a multivariate distribution by means of a graph. Relevant features of the distribution are represented by vertices, edges and other…

Statistics Theory · Mathematics 2020-09-03 Alberto Roverato , Robert Castelo

We develop a method to calculate the persistent currents and their spatial distribution (and transport properties) on graphs made of quasi-1D diffusive wires. They are directly related to the field derivatives of the determinant of a matrix…

Mesoscale and Nanoscale Physics · Physics 2009-10-31 M. Pascaud , G. Montambaux

It is possible to represent each of a number of Markov chains as an evolving sequence of connected subsets of a directed acyclic graph that grow in the following way: initially, all vertices of the graph are unoccupied, particles are fed in…

Probability · Mathematics 2015-03-17 Steven N. Evans , Rudolf Gruebel , Anton Wakolbinger

A discrete time stochastic model for a multiagent system given in terms of a large collection of interacting Markov chains is studied. The evolution of the interacting particles is described through a time inhomogeneous transition…

Probability · Mathematics 2011-06-17 Amarjit Budhiraja , Pierre Del Moral , Sylvain Rubenthaler

We describe a simple method that can be used to sample the rare fluctuations of discrete-time Markov chains. We focus on the case of Markov chains with well-defined steady-state measures, and derive expressions for the large-deviation rate…

Statistical Mechanics · Physics 2018-03-28 Stephen Whitelam