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Related papers: On representing chemical environments

200 papers

We first develop a descriptor-based representation of atomic environments by devising two local similarity indices defined from an atom-partitioned quantum-chemical descriptor. Then, we employ this representation to explore the size-,…

Materials Science · Physics 2014-02-06 M İ Törehan Balta , Çetin Kılıç

In alloys exhibiting substitutional disorder, the variety of atomic environments manifests itself as a `disorder broadening' in their core level binding energy spectra. Disorder broadening can be measured experimentally, and in principle…

Materials Science · Physics 2014-07-14 T. L. Underwood , G. J. Ackland , R. J. Cole

Coupled atomistic-continuum methods can describe large domains and model dynamic material behavior for a much lower computational cost than traditional atomistic techniques. However, these multiscale frameworks suffer from wave reflections…

Mesoscale and Nanoscale Physics · Physics 2022-08-19 Alexander S. Davis , Vinamra Agrawal

We derive equations for the strongly coupled system of light and dense atomic ensembles. The formalism includes an arbitrary internal level structure for the atoms and is not restricted to weak excitation of atoms by light. In the low light…

Atomic Physics · Physics 2016-06-07 Mark D. Lee , Stewart D. Jenkins , Janne Ruostekoski

Due to the Heisenberg uncertainty principle, various classical systems differing only on the scale smaller than Planck's cell correspond to the same quantum system. This fact is used to find a unique semiclassical representation without the…

Quantum Physics · Physics 2009-11-10 Jiri Vanicek

Discovering the low-energy conformations of a molecule is of great interest to computational chemists, with applications in {\em in silico} materials design and drug discovery. In this paper, we propose a variable neighbourhood search…

Quantum Physics · Physics 2019-06-25 D. J. J. Marchand , M. Noori , A. Roberts , G. Rosenberg , B. Woods , U. Yildiz , M. Coons , D. Devore , P. Margl

In this paper a relative number density parameter, called the neighborhood function, is introduced so that the crowded nature of the neighborhood of individual sources can be described. With this parameter one can determine the probability…

Astrophysics · Physics 2009-11-13 Yi-Ping Qin , Lian-Zhong Lv , Fu-Wen Zhang , Bin-Bin Zhang , Jin Zhang

A new approach for describing the effective electronic states of "atoms in compounds" to study the properties of molecules and condensed matter which are circumscribed by the operators heavily concentrated in atomic cores is proposed. Among…

Chemical Physics · Physics 2014-12-02 Anatoly V. Titov , Yuriy V. Lomachuk , Leonid V. Skripnikov

We use scattering theoretic methods to prove strong dynamical and exponential localization for one dimensional, continuum, Anderson-type models with singular distributions; in particular the case of a Bernoulli distribution is covered. The…

Mathematical Physics · Physics 2014-12-30 David Damanik , Robert Sims , Günter Stolz

O(N) methods are based on the decay properties of the density matrix in real space, an effect sometimes refered to as near-sightedness. We show, that in addition to this near-sightedness in real space there is also a near-sightedness in…

Condensed Matter · Physics 2007-05-23 S. Goedecker , O. V. Ivanov

Mesoscale behavior of polymers is frequently described by universal laws. This physical property motivates us to propose a new modeling concept, grouping polymers into classes with a common long-wavelength representation. In the same class…

Soft Condensed Matter · Physics 2016-10-25 Guojie Zhang , Torsten Stuehn , Kostas Ch. Daoulas , Kurt Kremer

One of the great challenges of modern science is to faithfully model, and understand, matter at a wide range of scales. Starting with atoms, the vastness of the space of possible configurations poses a formidable challenge to any simulation…

Materials Science · Physics 2017-08-28 Sebastian E. Ahnert , William P. Grant , Chris J. Pickard

It has been a long-standing materials science challenge to establish structure-property relations in amorphous solids. Here we introduce a rotation-variant local structure representation that enables different predictions for different…

Materials Science · Physics 2022-03-15 Zhao Fan , Evan Ma

Understanding how atomic-level structures govern the mechanical properties of amorphous materials remains a fundamental challenge in solid-state physics. Under mechanical loading, amorphous materials exhibit simple affine and spatially…

Materials Science · Physics 2025-04-01 Emi Minamitani , Takenobu Nakamura , Ippei Obayashi , Hideyuki Mizuno

We present a new theory for partitioning simulations of periodic and solid-state systems into physically sound atomic contributions at the level of Kohn-Sham density functional theory. Our theory is based on spatially localized linear…

Chemical Physics · Physics 2024-10-01 Luna Zamok , Janus J. Eriksen

With the rapid development of machine learning, improving its explainability has become a crucial research goal. We study the problem of making the clusters more explainable by investigating the cluster descriptors. Given a set of objects…

Machine Learning · Computer Science 2022-10-21 Xiaoyuan Liu , Ilya Tyagin , Hayato Ushijima-Mwesigwa , Indradeep Ghosh , Ilya Safro

We explore the structural signatures of excitations in amorphous materials with the atomic cluster expansion (ACE), a universal and complete linear basis of descriptors of the atomic environment. Body-orderd linear classifiers are…

Disordered Systems and Neural Networks · Physics 2024-10-07 Joerg Rottler , Christoph Ortner

Physics has been transforming our view of nature for centuries. While combining physical knowledge with computational approaches has enabled detailed modeling of physical systems' evolution, understanding the emergence of patterns and…

Computational Physics · Physics 2025-06-09 Guang-Xing Li

Optimal sensor placement (OSP) is critical for efficient, accurate monitoring, control, and inference in complex physical systems. We propose a machine-learning-based feature attribution (FA) framework to identify OSP for target…

Computational Engineering, Finance, and Science · Computer Science 2026-04-07 Sze Chai Leung , Di Zhou , H. Jane Bae

We present a universal method for the large-scale prediction of the atomic structure of clusters. Our algorithm performs the joint evolutionary search for all clusters in a given area of the compositional space and takes advantage of…

Materials Science · Physics 2018-12-18 S. V. Lepeshkin , V. S. Baturin , Yu. A. Uspenskii , Artem R. Oganov
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