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Related papers: A new class of metrics for spike trains

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A wide variety of approaches to estimate the degree of synchrony between two or more spike trains have been proposed. One of the most recent methods is the ISI-distance which extracts information from the interspike intervals (ISIs) by…

Biological Physics · Physics 2012-12-11 Thomas Kreuz , Daniel Chicharro , Martin Greschner , Ralph G Andrzejak

We present the mathematical basis of a new approach to the analysis of temporal coding. The foundation of the approach is the construction of several families of novel distances (metrics) between neuronal impulse trains. In contrast to most…

Neurons and Cognition · Quantitative Biology 2007-05-23 Jonathan D. Victor , Keith P. Purpura

Background: It is commonly assumed in neuronal coding that repeated presentations of a stimulus to a coding neuron elicit similar responses. One common way to assess similarity are spike train distances. These can be divided into…

Neurons and Cognition · Quantitative Biology 2018-02-22 Eero Satuvuori , Thomas Kreuz

Estimating the degree of synchrony or reliability between two or more spike trains is a frequent task in both experimental and computational neuroscience. In recent years, many different methods have been proposed that typically compare the…

Biological Physics · Physics 2012-12-11 Thomas Kreuz , Julie S. Haas , Alice Morelli , Henry D. I. Abarbanel , Antonio Politi

Recently, the SPIKE-distance has been proposed as a parameter-free and time-scale independent measure of spike train synchrony. This measure is time-resolved since it relies on instantaneous estimates of spike train dissimilarity. However,…

Data Analysis, Statistics and Probability · Physics 2012-12-11 Thomas Kreuz , Daniel Chicharro , Conor Houghton , Ralph G Andrzejak , Florian Mormann

Measures of spike train synchrony have become important tools in both experimental and theoretical neuroscience. Three time-resolved measures called the ISI-distance, the SPIKE-distance, and SPIKE-synchronization have already been…

Data Analysis, Statistics and Probability · Physics 2020-01-14 Eero Satuvuori , Irene Malvestio , Thomas Kreuz

Statistical analysis and inferences on spike trains are one of the central topics in neural coding. It is of great interest to understand the underlying distribution and geometric structure of given spike train data. However, a fundamental…

Neurons and Cognition · Quantitative Biology 2015-06-11 Sergiusz Wesolowski , Alexandre A. Nikonov , Robert J. Contreras , Wei Wu

Statistical similarities between neuronal spike trains could reveal significant information on complex underlying processing. In general, the similarity between synchronous spike trains is somewhat easy to identify. However, the similar…

Neurons and Cognition · Quantitative Biology 2021-03-16 Sathish Ande , Jayanth R Regatti , Neha Pandey , Ajith Karunarathne , Lopamudra Giri , Soumya Jana

Neurons in the central nervous system communicate with each other with the help of series of Action Potentials, or spike trains. Various studies have shown that neurons encode information in different features of spike trains, such as the…

Neurons and Cognition · Quantitative Biology 2014-10-21 Shubhanshu Shekhar , Kaushik Majumdar

The metrization of the space of neural responses is an ongoing research program seeking to find natural ways to describe, in geometrical terms, the sets of possible activities in the brain. One component of this program are the {\em spike…

Neurons and Cognition · Quantitative Biology 2009-07-21 Alexander J. Dubbs , Brad A. Seiler , Marcelo O. Magnasco

Measures of spike train synchrony have proven a valuable tool in both experimental and computational neuroscience. Particularly useful are time-resolved methods such as the ISI- and the SPIKE-distance, which have already been applied in…

Neurons and Cognition · Quantitative Biology 2015-11-09 Mario Mulansky , Nebojsa Bozanic , Andreea Sburlea , Thomas Kreuz

Background: Measures of spike train synchrony are widely used in both experimental and computational neuroscience. Time-scale independent and parameter-free measures, such as the ISI-distance, the SPIKE-distance and SPIKE-synchronization,…

Data Analysis, Statistics and Probability · Physics 2017-05-31 Eero Satuvuori , Mario Mulansky , Nebojsa Bozanic , Irene Malvestio , Fleur Zeldenrust , Kerstin Lenk , Thomas Kreuz

Measures of multiple spike train synchrony are essential in order to study issues such as spike timing reliability, network synchronization, and neuronal coding. These measures can broadly be divided in multivariate measures and averages…

Neurons and Cognition · Quantitative Biology 2012-12-11 T. Kreuz , D. Chicharro , R. G. Andrzejak , J. S. Haas , H. D. I. Abarbanel

By introducing the twin concepts of reliability and precision along with the corresponding measures, Mainen and Sejnowski's seminal 1995 paper "Reliability of spike timing in neocortical neurons" (Mainen and Sejnowski, 1995) paved the way…

Neurons and Cognition · Quantitative Biology 2025-10-09 Thomas Kreuz

We propose a statistical method for modeling the non-Poisson variability of spike trains observed in a wide range of brain regions. Central to our approach is the assumption that the variance and the mean of interspike intervals are related…

Neurons and Cognition · Quantitative Biology 2015-05-22 Shinsuke Koyama

This work introduces a novel dissimilarity measure between two convex cones, based on the max-min angle between them. We demonstrate that this measure is closely related to the Pompeiu-Hausdorff distance, a well-established metric for…

Optimization and Control · Mathematics 2025-11-14 Welington de Oliveira , Valentina Sessa , David Sossa

We introduce a general class of distances (metrics) between Markov chains, which are based on linear behaviour. This class encompasses distances given topologically (such as the total variation distance or trace distance) as well as by…

Formal Languages and Automata Theory · Computer Science 2016-06-27 Przemysław Daca , Thomas A. Henzinger , Jan Křetínský , Tatjana Petrov

Background: Spike trains of multiple neurons can be analyzed following the summed population (SP) or the labeled line (LL) hypothesis. Responses to external stimuli are generated by a neuronal population as a whole or the individual neurons…

Neurons and Cognition · Quantitative Biology 2018-09-17 Eero Satuvuori , Mario Mulansky , Andreas Daffertshofer , Thomas Kreuz

Statistical properties of spike trains measured from a sensory neuron in-vivo are studied experimentally and theoretically. Experiments are performed on an identified neuron in the visual system of the blowfly. It is shown that the spike…

Biological Physics · Physics 2007-05-23 N. Brenner , O. Agam , W. Bialek , R. de Ruyter van Steveninck

This article contains two main theoretical results on neural spike train models. The first assumes that the spike train is modeled as a counting or point process on the real line where the conditional intensity function is a product of a…

Statistics Theory · Mathematics 2007-06-13 Hock Peng Chan , Wei-Liem Loh
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