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Related papers: Cell Swelling by Osmosis: a Variational Approach

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Dynamics of a single vesicle under shear flow between two parallel plates is studied using two-dimensional lattice-Boltzmann simulations. We first present how we adapted the lattice-Boltzmann method to simulate vesicle dynamics, using an…

Soft Condensed Matter · Physics 2011-09-16 Badr Kaoui , Jens Harting , Chaouqi Misbah

Inspired by dense contractile tissues, where cells are subject to periodic deformation, we formulate and study a generic hydrodynamic theory of pulsating active liquids. Combining mechanical and phenomenological arguments, we postulate that…

Soft Condensed Matter · Physics 2025-09-25 Tirthankar Banerjee , Thibault Desaleux , Jonas Ranft , Étienne Fodor

The conventional no-slip boundary condition leads to a non-integrable stress singularity at a moving contact line. This makes numerical simulations challenging, especially when capillary effects are essential for the dynamics of the flow.…

Fluid Dynamics · Physics 2017-09-18 Hanna Holmgren , Gunilla Kreiss

We use a simple and efficient computer model to investigate the physical properties of bilayer membranes. The amphiphilic molecules are modeled as short rigid trimers with finite range pair interactions between them. The pair potentials…

Soft Condensed Matter · Physics 2009-11-10 Oded Farago

Metabolic substrates, such as oxygen and glucose, are rapidly delivered to the cell through filtration across microvessels walls. Modelling this important process is complicated by the coupling between flow and transport equations, which…

Subcellular Processes · Quantitative Biology 2013-08-12 Laura Facchini , Alberto Bellin , Eleuterio F. Toro

Recent experiments by Kantsler et. al. (2007) have shown that the relaxational dynamics of a vesicle in external elongation flow is accompanied by the formation of wrinkles on a membrane. Motivated by these experiments we present a theory…

Soft Condensed Matter · Physics 2013-05-29 K. S. Turitsyn , S. S. Vergeles

We use an elastic model to explore faceting of solid-wall vesicles with elastic heterogeneities. We show that faceting occurs in regions where the vesicle wall is softer, such as areas of reduced wall thicknesses or concentrated in…

Soft Condensed Matter · Physics 2012-05-30 Rastko Sknepnek , Monica Olvera de la Cruz

The cell motility problem has been investigated for a long time. Today, many biologists, physicists, and mathematicians are looking for new research instruments for this process. A simple 2D model of a free-boundary cell moving on a…

Cell Behavior · Quantitative Biology 2024-01-03 Vitaly Chernik , Pavel Buklemishev

The shape of liquid surface in a rotating frame depends on the angular velocity. In this experiment, a fluid in a rectangular container with a small width is placed on a rotating table. A smartphone fixed to the rotating frame…

Physics Education · Physics 2019-08-14 Martín Monteiro , Fernando Tornaría , Arturo C. Marti

This brief note addresses the free boundary problem arising from the steady two-dimensional seepage flow through a rectangular dam. The flow problem consists in finding the free boundary location, and the velocity and pressure fields. The…

Fluid Dynamics · Physics 2015-07-21 Carmine Di Nucci

The patterns arising from the differential swelling of gels are investigated experimentally and theoretically as a model for the differential growth of living tissues. Two geometries are considered: a thin strip of soft gel clamped to a…

Soft Condensed Matter · Physics 2009-11-11 Thierry Mora , Arezki Boudaoud

We investigate the impact velocity beyond which the ejection of smaller droplets from the main droplet (splashing) occurs for droplets impacting a smooth surface. We examine its dependence on the surface wetting properties and droplet…

Fluid Dynamics · Physics 2017-01-11 T. C. de Goede , K. G. de Bruin , D. Bonn

Molecular dynamics simulations are used to study the behavior of closely-fitting spherical and ellipsoidal particles moving through a fluid-filled cylinder at nanometer scales. The particle, the cylinder wall and the fluid solvent are all…

Soft Condensed Matter · Physics 2007-05-23 German Drazer , Boris Khusid , Joel Koplik , Andreas Acrivos

The immersed boundary method is a mathematical formulation and numerical method for solving fluid-structure interaction problems. For many biological problems, such as models that include the cell membrane, the immersed structure is a…

Numerical Analysis · Mathematics 2018-06-07 Ondrej Maxian , Andrew T. Kassen , Wanda Strychalski

We develop a double mean-field theory for charged macrogels immersed in electrolyte solutions in the spirit of the cell model approach. We first demonstrate that the equilibrium sampling of a single explicit coarse-grained charged polymer…

Soft Condensed Matter · Physics 2020-04-22 Jonas Landsgesell , David Sean , Patrick Kreissl , Kai Szuttor , Christian Holm

A simple one-dimensional mechanical model is proposed for splitting instability in swollen membranes. The splitting instability occurs by ring constriction. The bifurcation can be both subcritical and supercritical, depending on the…

Soft Condensed Matter · Physics 2015-06-18 Hidetsugu Sakaguchi , Satomi Maeyama

The vertex model is widely used to describe the dynamics of epithelial tissues, because of its simplicity and versatility and the direct inclusion of biophysical parameters. Here, it is shown that quite generally, when cells modify their…

Soft Condensed Matter · Physics 2020-11-25 Fernanda Perez-Verdugo , Jean-Francois Joanny , Rodrigo Soto

A thermodynamically consistent phase-field model is introduced for simulating motion and shape transformation of vesicles under flow conditions. In particular, a general slip boundary condition is used to describe the interaction between…

Numerical Analysis · Mathematics 2020-12-11 Lingyue Shen , Zhiliang Xu , Ping Lin , Huaxiong Huang , Shixin Xu

The symmetry method is used to derive solutions of Einstein's equations for fluid spheres using an isotropic metric and a velocity four vector that is non-comoving. Initially the Lie, classical approach is used to review and provide a…

General Relativity and Quantum Cosmology · Physics 2010-05-12 Ron Wiltshire

We study the Schloegl model in a vesicle with semi-permeable membrane. The diffusion constant takes a smaller value in the membrane region, which prevents the outflow of self-catalytic product. A nonequilibrium state is stably maintained…

Statistical Mechanics · Physics 2009-11-11 Hidetsugu Sakaguchi