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In this paper, we obtain complete characterization for nested canalyzing functions (NCFs) by obtaining its unique algebraic normal form (polynomial form). We introduce a new concept, LAYER NUMBER for NCF. Based on this, we obtain explicit…

Discrete Mathematics · Computer Science 2011-12-01 Yuan Li , John O. Adeyeye , Reinhard Laubenbacher

Nested canalizing Boolean (NCF) functions play an important role in biological motivated regulative networks and in signal processing, in particular describing stack filters. It has been conjectured that NCFs have a stabilizing effect on…

Information Theory · Computer Science 2015-06-11 Johannes Georg Klotz , Reinhard Heckel , Steffen Schober

We introduce the nested canalyzing depth of a function, which measures the extent to which it retains a nested canalyzing structure. We characterize the structure of functions with a given depth and compute the expected activities and…

Molecular Networks · Quantitative Biology 2012-03-01 Lori Layne , Elena Dimitrova , Matthew Macauley

The canalizing properties of biological functions have been mainly studied in the context of Boolean modelling of gene regulatory networks. An important mathematical consequence of canalization is a low average sensitivity, which ensures in…

Combinatorics · Mathematics 2023-07-04 Élisabeth Remy , Paul Ruet

Many researchers have studied symmetry properties of various Boolean functions. A class of Boolean functions, called nested canalyzing functions (NCFs), has been used to model certain biological phenomena. We identify some interesting…

Discrete Mathematics · Computer Science 2023-06-22 Daniel J. Rosenkrantz , Madhav V. Marathe , S. S. Ravi , Richard E. Stearns

Sensitivity, block sensitivity and certificate complexity are basic complexity measures of Boolean functions. The famous sensitivity conjecture claims that sensitivity is polynomially related to block sensitivity. However, it has been…

Computational Complexity · Computer Science 2015-06-09 Andris Ambainis , Krišjānis Prūsis , Jevgēnijs Vihrovs

Boolean nested canalizing functions (NCFs) have important applications in molecular regulatory networks, engineering and computer science. In this paper, we study their certificate complexity. For both Boolean values $b\in\{0,1\}$, we…

Combinatorics · Mathematics 2021-02-15 Yuan Li , Frank Ingram , Huaming Zhang

Boolean nested canalizing functions (NCFs) have important applications in molecular regulatory networks, engineering and computer science. In this paper, we study their certificate complexity. For both Boolean values $b\in\{0,1\}$, we…

Discrete Mathematics · Computer Science 2023-06-22 Yuan Li , Frank Ingram , Huaming Zhang

We prove that nested canalizing functions are the minimum-sensitivity Boolean functions for any given activity ratio and we characterize the sensitivity boundary which has a nontrivial fractal structure. We further observe, on an extensive…

Molecular Networks · Quantitative Biology 2022-03-23 H. Coban , A. Kabakcioglu

The sensitivity conjecture of Nisan and Szegedy [CC '94] asks whether for any Boolean function $f$, the maximum sensitivity $s(f)$, is polynomially related to its block sensitivity $bs(f)$, and hence to other major complexity measures.…

Computational Complexity · Computer Science 2016-12-08 Karthik C. S. , Sébastien Tavenas

Sensitivity \cite{CD82,CDR86} and block sensitivity \cite{Nisan91} are two important complexity measures of Boolean functions. A longstanding open problem in decision tree complexity, the "Sensitivity versus Block Sensitivity" question,…

Computational Complexity · Computer Science 2013-06-25 Andris Ambainis , Yihan Gao , Jieming Mao , Xiaoming Sun , Song Zuo

The sensitivity conjecture which claims that the sensitivity complexity is polynomially related to block sensitivity complexity, is one of the most important and challenging problem in decision tree complexity theory. Despite of a lot of…

Computational Complexity · Computer Science 2016-09-15 Kun He , Qian Li , Xiaoming Sun

Determining the maximal separation between sensitivity and block sensitivity of Boolean functions is of interest for computational complexity theory. We construct a sequence of Boolean functions with bs(f) = 1/2 s(f)^2 + 1/2 s(f). The best…

Computational Complexity · Computer Science 2010-12-09 Madars Virza

Sensitivity, certificate complexity and block sensitivity are widely used Boolean function complexity measures. A longstanding open problem, proposed by Nisan and Szegedy, is whether sensitivity and block sensitivity are polynomially…

Computational Complexity · Computer Science 2015-03-27 Andris Ambainis , Krišjānis Prūsis

We investigate the relation between the block sensitivity $\text{bs}(f)$ and fractional block sensitivity $\text{fbs}(f)$ complexity measures of Boolean functions. While it is known that $\text{fbs}(f) = O(\text{bs}(f)^2)$, the best known…

Computational Complexity · Computer Science 2018-10-08 Andris Ambainis , Krišjānis Prūsis , Jevgēnijs Vihrovs

Boolean networks are used to model biological networks such as gene regulatory networks. Often Boolean networks show very chaotic behavior which is sensitive to any small perturbations.In order to reduce the chaotic behavior and to attain…

Systems and Control · Computer Science 2014-09-16 Camellia Ray , Jayanta Kumar Das , Pabitra Pal Choudhury

Sensitivity conjecture is a longstanding and fundamental open problem in the area of complexity measures of Boolean functions and decision tree complexity. The conjecture postulates that the maximum sensitivity of a Boolean function is…

Computational Complexity · Computer Science 2014-11-14 Andris Ambainis , Mohammad Bavarian , Yihan Gao , Jieming Mao , Xiaoming Sun , Song Zuo

Boolean networks are used to model biological networks such as gene regulatory networks. Often Boolean networks show very chaotic behaviour which is sensitive to any small perturbations. In order to reduce the chaotic behaviour and to…

Systems and Control · Computer Science 2014-09-25 Camellia Ray , Jayanta Kumar Das , Pabitra Pal Choudhury

Boolean network models of molecular regulatory networks have been used successfully in computational systems biology. The Boolean functions that appear in published models tend to have special properties, in particular the property of being…

Dynamical Systems · Mathematics 2024-07-09 Yuan Li , John O. Adeyeye , David Murrugarra , Boris Aguilar , Reinhard Laubenbacher

In a recent result, Knop, Lovett, McGuire and Yuan (STOC 2021) proved the log-rank conjecture for communication complexity, up to log n factor, for any Boolean function composed with AND function as the inner gadget. One of the main tools…

Computational Complexity · Computer Science 2024-06-14 Farzan Byramji , Vatsal Jha , Chandrima Kayal , Rajat Mittal
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