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Biomedical research results are being published at a high rate, and with existing search engines, the vast amount of published work is usually easily accessible. However, reproducing published results, either experimental data or…

Molecular Networks · Quantitative Biology 2017-06-19 Kai-Wen Liang , Qinsi Wang , Cheryl Telmer , Divyaa Ravichandran , Peter Spirtes , Natasa Miskov-Zivanov

Modern single-cell flow and mass cytometry technologies measure the expression of several proteins of the individual cells within a blood or tissue sample. Each profiled biological sample is thus represented by a set of hundreds of…

Machine Learning · Computer Science 2022-06-29 Siyuan Shan , Vishal Baskaran , Haidong Yi , Jolene Ranek , Natalie Stanley , Junier Oliva

Model-based approaches for image reconstruction, analysis and interpretation have made significant progress over the last decades. Many of these approaches are based on either mathematical, physical or biological models. A challenge for…

Computer Vision and Pattern Recognition · Computer Science 2019-10-01 Daniel Rueckert , Julia A. Schnabel

Data Mining is the process of examining the information from different point of view and compressing it for the relevant data. This data can also be utilized to build the incomes. Data Mining is also known as Data or Knowledge Discovery.…

Databases · Computer Science 2016-10-17 Kratika Tyagi , Prof. Sanjeev Thakur

We present a new annotated microscopic cellular image dataset to improve the effectiveness of machine learning methods for cellular image analysis. Cell counting is an important step in cell analysis. Typically, domain experts manually…

Image and Video Processing · Electrical Eng. & Systems 2024-11-20 Abdurahman Ali Mohammed , Catherine Fonder , Donald S. Sakaguchi , Wallapak Tavanapong , Surya K. Mallapragada , Azeez Idris

Medical imaging is an important research field with many opportunities for improving patients' health. However, there are a number of challenges that are slowing down the progress of the field as a whole, such optimizing for publication. In…

Image and Video Processing · Electrical Eng. & Systems 2022-05-14 Gaël Varoquaux , Veronika Cheplygina

Skin conditions are a global health concern, ranking the fourth highest cause of nonfatal disease burden when measured as years lost due to disability. As diagnosing, or classifying, skin diseases can help determine effective treatment,…

Computer Vision and Pattern Recognition · Computer Science 2019-06-05 Jeremy Kawahara , Ghassan Hamarneh

Imaging assays of cellular function, especially those using fluorescent stains, are ubiquitous in the biological and medical sciences. Despite advances in computer vision, such images are often analyzed using only manual or rudimentary…

Computer Vision and Pattern Recognition · Computer Science 2017-06-06 Lena R. Bartell , Lawrence J. Bonassar , Itai Cohen

AI models have shown promise in many medical imaging tasks. However, our ability to explain what signals these models have learned is severely lacking. Explanations are needed in order to increase the trust in AI-based models, and could…

Many visualization techniques have been created to explain the behavior of computer vision models, but they largely consist of static diagrams that convey limited information. Interactive visualizations allow users to more easily interpret…

Computer Vision and Pattern Recognition · Computer Science 2023-12-19 Devon Ulrich , Ruth Fong

Generative adversarial networks (GANs) have been widely investigated for many potential applications in medical imaging. DatasetGAN is a recently proposed framework based on modern GANs that can synthesize high-quality segmented images…

Computer Vision and Pattern Recognition · Computer Science 2022-03-01 Zong Fan , Varun Kelkar , Mark A. Anastasio , Hua Li

Recent advances in Generative Adversarial Networks (GANs) have shown increasing success in generating photorealistic images. But they also raise challenges to visual forensics and model attribution. We present the first study of learning…

Computer Vision and Pattern Recognition · Computer Science 2019-08-19 Ning Yu , Larry Davis , Mario Fritz

Figures visually represent an essential piece of information and provide an effective means to communicate scientific facts. Recently there have been many efforts toward extracting data directly from figures, specifically from tables,…

Information Retrieval · Computer Science 2023-07-13 Anurag Dhote , Mohammed Javed , David S Doermann

Images and text co-occur constantly on the web, but explicit links between images and sentences (or other intra-document textual units) are often not present. We present algorithms that discover image-sentence relationships without relying…

Computation and Language · Computer Science 2019-09-04 Jack Hessel , Lillian Lee , David Mimno

Semantic segmentation of medical images aims to associate a pixel with a label in a medical image without human initialization. The success of semantic segmentation algorithms is contingent on the availability of high-quality imaging data…

Medical Image Retrieval (MIR) helps doctors quickly find similar patients' data, which can considerably aid the diagnosis process. MIR is becoming increasingly helpful due to the wide use of digital imaging modalities and the growth of the…

Computer Vision and Pattern Recognition · Computer Science 2020-07-20 Yang Feng , Yubao Liu , Jiebo Luo

In this work, the possibilities for segmentation of cells from their background and each other in digital image were tested, combined and improoved. Lot of images with young, adult and mixture cells were able to prove the quality of…

Computer Vision and Pattern Recognition · Computer Science 2011-01-13 Jan Urban

Advances in generative models have led to significant interest in image synthesis, demonstrating the ability to generate high-quality images for a diverse range of text prompts. Despite this progress, most studies ignore the presence of…

Artificial Intelligence · Computer Science 2024-07-02 Nila Masrourisaadat , Nazanin Sedaghatkish , Fatemeh Sarshartehrani , Edward A. Fox

Deep learning techniques have successfully been employed in numerous computer vision tasks including image segmentation. The techniques have also been applied to medical image segmentation, one of the most critical tasks in computer-aided…

Computer Vision and Pattern Recognition · Computer Science 2020-06-30 Titinunt Kitrungrotsakul , Iwamoto Yutaro , Lanfen Lin , Ruofeng Tong , Jingsong Li , Yen-Wei Chen