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We explore a systematic approach to studying the dynamics of evolving networks at a coarse-grained, system level. We emphasize the importance of finding good observables (network properties) in terms of which coarse grained models can be…

Real bipartite networks combine degree-constrained random mixing with structured, locality-like rules. We introduce a statistical filter that benchmarks node-level bipartite clustering against degree-preserving randomizations to classify…

Physics and Society · Physics 2025-09-27 Lucía S. Ramírez , Roya Aliakbarisani , M. Ángeles Serrano , Marián Boguñá

Sampling random nodes is a fundamental algorithmic primitive in the analysis of massive networks, with many modern graph mining algorithms critically relying on it. We consider the task of generating a large collection of random nodes in…

Social and Information Networks · Computer Science 2021-10-27 Omri Ben-Eliezer , Talya Eden , Joel Oren , Dimitris Fotakis

We present a parallelized bijective graph matching algorithm that leverages seeds and is designed to match very large graphs. Our algorithm combines spectral graph embedding with existing state-of-the-art seeded graph matching procedures.…

We propose two spectral algorithms for partitioning nodes in directed graphs respectively with a cyclic and an acyclic pattern of connection between groups of nodes. Our methods are based on the computation of extremal eigenvalues of the…

Data Structures and Algorithms · Computer Science 2018-05-09 H. Van Lierde , T. W. S. Chow , J. -C. Delvenne

Coarse-graining has become an area of tremendous importance within many different research fields. For molecular simulation, coarse-graining bears the promise of finding simplified models such that long-time simulations of large-scale…

Chemical Physics · Physics 2019-09-04 Feliks Nüske , Lorenzo Boninsegna , Cecilia Clementi

Biregular bipartite graphs have been proven to have similar edge distributions to random bipartite graphs and thus have nice pseudorandomness and expansion properties. Thus it is quite desirable to find a biregular bipartite spanning…

Combinatorics · Mathematics 2024-10-29 Dandan Fan , Xiaofeng Gu , Huiqiu Lin

Finding coarse representations of large graphs is an important computational problem in the fields of scientific computing, large scale graph partitioning, and the reduction of geometric meshes. Of particular interest in all of these fields…

Discrete Mathematics · Computer Science 2022-04-26 Christopher Brissette , Andy Huang , George Slota

Graph clustering is an important algorithmic technique for analysing massive graphs, and has been widely applied in many research fields of data science. While the objective of most graph clustering algorithms is to find a vertex set of low…

Data Structures and Algorithms · Computer Science 2025-08-08 Joyentanuj Das , Suranjan De , He Sun

We propose a novel and systematic method for coarse-graining oscillator networks described by phase equations. Our coarse-graining method enables us to obtain the closed coarse-grained equations for a few effective eigenmodes, which is…

Adaptation and Self-Organizing Systems · Physics 2013-11-06 Yuki Izumida , Hiroshi Kori

Inspired by the recent neuroscience studies on the left-right asymmetry of the human brain in processing low and high spatial frequency information, this paper introduces a dual skipping network which carries out coarse-to-fine object…

Computer Vision and Pattern Recognition · Computer Science 2018-05-29 Changmao Cheng , Yanwei Fu , Yu-Gang Jiang , Wei Liu , Wenlian Lu , Jianfeng Feng , Xiangyang Xue

We study the hierarchy of communities in real-world networks under a generic stochastic block model, in which the connection probabilities are structured in a binary tree. Under such model, a standard recursive bi-partitioning algorithm is…

Statistics Theory · Mathematics 2021-11-19 Lihua Lei , Xiaodong Li , Xingmei Lou

In modern data center networks, thousands of hosts contend for shared link capacity; the scale of these systems makes centralized scheduling impractical. This article models such scheduling as a bipartite matching problem under…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-04-14 Moonmoon Mohanty , Gautham Bolar , Preetam Patil , Ayalvadi Ganesh , Jean-Francois Chamberland , Parimal Parag

Due to wide applications in diverse fields, random walks subject to stochastic resetting have attracted considerable attention in the last decade. In this paper, we study discrete-time random walks on complex network with multiple resetting…

Statistical Mechanics · Physics 2021-10-01 Shuang Wang , Hanshuang Chen , Feng Huang

We study the biased random walk process in random uncorrelated networks with arbitrary degree distributions. In our model, the bias is defined by the preferential transition probability, which, in recent years, has been commonly used to…

Disordered Systems and Neural Networks · Physics 2013-05-29 Agata Fronczak , Piotr Fronczak

Solving large systems of equations is a challenge for modeling natural phenomena, such as simulating subsurface flow. To avoid systems that are intractable on current computers, it is often necessary to neglect information at small scales,…

Can complex engineered and biological networks be coarse-grained into smaller and more understandable versions in which each node represents an entire pattern in the original network? To address this, we define coarse-graining units (CGU)…

Molecular Networks · Quantitative Biology 2009-11-10 Shalev Itzkovitz , Reuven Levitt , Nadav Kashtan , Ron Milo , Michael Itzkovitz , Uri Alon

Directed networks are broadly used to represent asymmetric relationships among units. Co-clustering aims to cluster the senders and receivers of directed networks simultaneously. In particular, the well-known spectral clustering algorithm…

Machine Learning · Statistics 2022-04-12 Xiao Guo , Yixuan Qiu , Hai Zhang , Xiangyu Chang

We consider distributed networks, such as peer-to-peer networks, whose structure can be manipulated by adjusting the rules by which vertices enter and leave the network. We focus in particular on degree distributions and show that, with…

Physics and Society · Physics 2007-10-18 Gourab Ghoshal , M. E. J. Newman

Coarse graining model is a promising way to analyze and visualize large-scale networks. The coarse-grained networks are required to preserve the same statistical properties as well as the dynamic behaviors as the initial networks. Some…

Physics and Society · Physics 2011-05-31 An Zeng , Linyuan Lu