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We consider pulse-coupled Leaky Integrate-and-Fire neural networks with randomly distributed synaptic couplings. This random dilution induces fluctuations in the evolution of the macroscopic variables and deterministic chaos at the…

Chaotic Dynamics · Physics 2015-04-14 D. Angulo-Garcia , A. Torcini

We present a new method, Non-Stationary Forward Flux Sampling, that allows efficient simulation of rare events in both stationary and non-stationary stochastic systems. The method uses stochastic branching and pruning to achieve uniform…

Molecular Networks · Quantitative Biology 2015-06-03 Nils B. Becker , Rosalind J. Allen , Pieter Rein ten Wolde

Stochastic blockmodels are generative network models where the vertices are separated into discrete groups, and the probability of an edge existing between two vertices is determined solely by their group membership. In this paper, we…

Statistical Mechanics · Physics 2013-11-12 Tiago P. Peixoto

We introduce temporal flows on temporal networks, i.e., networks the links of which exist only at certain moments of time. Such networks are ephemeral in the sense that no link exists after some time. Our flow model is new and differs from…

Data Structures and Algorithms · Computer Science 2017-01-23 Eleni C. Akrida , Jurek Czyzowicz , Leszek Gasieniec , Lukasz Kuszner , Paul G. Spirakis

Akin to electric circuits, we construct biocircuits that are manipulated by cutting and assembling channels through which stochastic information flows. This diagrammatic manipulation allows us to create a method which constructs networks by…

Molecular Networks · Quantitative Biology 2016-11-15 Cameron Ferwerda , Ovidiu Lipan

We consider general, steady, balanced flows of a commodity over a network where an instance of the network flow is characterized by edge flows and nodal potentials. Edge flows in and out of a node are assumed to be conserved, thus…

Optimization and Control · Mathematics 2015-04-06 Marc Vuffray , Sidhant Misra , Michael Chertkov

Stochastic network influences complicate graph filter design by producing uncertainty in network iteration matrix eigenvalues, the points at which the graph filter response is defined. While joint statistics for the eigenvalues typically…

Signal Processing · Electrical Eng. & Systems 2018-03-01 Stephen Kruzick , José M. F. Moura

Neural Networks (NNs) have been successfully employed to represent the state evolution of complex dynamical systems. Such models, referred to as NN dynamic models (NNDMs), use iterative noisy predictions of NN to estimate a distribution of…

Systems and Control · Electrical Eng. & Systems 2025-05-27 Rayan Mazouz , Karan Muvvala , Akash Ratheesh , Luca Laurenti , Morteza Lahijanian

Stochastic processes can model many emerging phenomena on networks, like the spread of computer viruses, rumors, or infectious diseases. Understanding the dynamics of such stochastic spreading processes is therefore of fundamental interest.…

Social and Information Networks · Computer Science 2019-01-07 Gerrit Großmann , Verena Wolf

There has been great interest in recent years on statistical models for dynamic networks. In this paper, I propose a stochastic block transition model (SBTM) for dynamic networks that is inspired by the well-known stochastic block model…

Social and Information Networks · Computer Science 2016-07-11 Kevin S. Xu

The Schr\"odinger bridge problem is concerned with finding a stochastic dynamical system bridging two marginal distributions that minimises a certain transportation cost. This problem, which represents a generalisation of optimal transport…

Machine Learning · Computer Science 2026-03-03 Kirill Tamogashev , Nikolay Malkin

Stochastic reaction networks is a powerful class of models for the representation a wide variety of population models including biochemistry. The control of such networks has been recently considered due to their important implications for…

Optimization and Control · Mathematics 2024-09-23 Corentin Briat , Mustafa Khammash

The increasing amount of controllable generation and consumption in distribution grids poses a severe challenge in keeping voltage values within admissible ranges. Existing approaches have considered different optimal power flow…

Systems and Control · Electrical Eng. & Systems 2019-07-25 Miguel Picallo , Adolfo Anta , Bart De Schutter

Many cellular behaviors are regulated by gene regulation networks, kinetics of which is one of the main subjects in the study of systems biology. Because of the low number molecules in these reacting systems, stochastic effects are…

Quantitative Methods · Quantitative Biology 2011-04-26 Jinzhi Lei

For the model of communication through a discrete memoryless channel using i.i.d. random block codes, where the channel is changing slowly from block to block, we propose a stochastic algorithm for adaptation of the generating distribution…

Information Theory · Computer Science 2018-01-23 Sergey Tridenski , Ram Zamir

Complex systems often have features that can be modeled by advanced mathematical tools [1]. Of special interests are the features of complex systems that have a network structure as such systems are important for modeling technological and…

Classical Physics · Physics 2019-06-13 Nikolay K. Vitanov , Kaloyan N. Vitanov , Zlatinka I. Dimitrova

Despite the enormous success of graph neural networks (GNNs), most existing GNNs can only be applicable to undirected graphs where relationships among connected nodes are two-way symmetric (i.e., information can be passed back and forth).…

Machine Learning · Computer Science 2021-10-15 Zhuo Tan , Bin Liu , Guosheng Yin

Synthetic biology is an interdisciplinary field aiming to design biochemical systems with desired behaviors. To this end, molecular controllers have been developed which, when embedded into a pre-existing ambient biochemical network,…

Molecular Networks · Quantitative Biology 2019-08-29 Tomislav Plesa , Guy-Bart Stan , Thomas E. Ouldridge , Wooli Bae

Quantum repeaters are envisioned to enable long-distance entanglement distribution. Analysis of quantum-repeater networks could hasten their realization by informing design decisions and research priorities. Determining derivatives of…

Quantum Physics · Physics 2025-08-12 Guus Avis , Stefan Krastanov

Finding the maximum cut of a graph (MAXCUT) is a classic optimization problem that has motivated parallel algorithm development. While approximate algorithms to MAXCUT offer attractive theoretical guarantees and demonstrate compelling…

Neural and Evolutionary Computing · Computer Science 2022-10-07 Bradley H. Theilman , Yipu Wang , Ojas D. Parekh , William Severa , J. Darby Smith , James B. Aimone
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