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Encoding models are used for predicting brain activity in response to sensory stimuli with the objective of elucidating how sensory information is represented in the brain. Encoding models typically comprise a nonlinear transformation of…

Neurons and Cognition · Quantitative Biology 2017-03-13 Umut Güçlü , Marcel A. J. van Gerven

Neural mass models have been actively used since the 1970s to model the coarse grained activity of large populations of neurons and synapses. They have proven especially useful in understanding brain rhythms. However, although motivated by…

Neurons and Cognition · Quantitative Biology 2016-11-08 Stephen Coombes , Áine Byrne

A networked oscillator based analysis is performed for periodic bluff body flows to examine and control the transfer of kinetic energy. Spatial modes extracted from the flow field with corresponding amplitudes form a set of oscillators…

Fluid Dynamics · Physics 2018-06-27 Aditya G. Nair , Steven L. Brunton , Kunihiko Taira

In computer simulations of spiking neural networks, often it is assumed that every two neurons of the network are connected by a probability of 2\%, 20\% of neurons are inhibitory and 80\% are excitatory. These common values are based on…

Neurons and Cognition · Quantitative Biology 2015-03-06 Hamed Seyed-allaei

Recent empirical work has shown that human children are adept at learning and reasoning with probabilities. Here, we model a recent experiment investigating the development of school-age children's non-symbolic probability reasoning ability…

Neurons and Cognition · Quantitative Biology 2023-05-09 Zilong Wang , Thomas R. Shultz , Ardvan S. Nobandegani

Simulation models of critical systems often have parameters that need to be calibrated using observed data. For expensive simulation models, calibration is done using an emulator of the simulation model built on simulation output at…

Methodology · Statistics 2023-08-24 Özge Sürer , Matthew Plumlee , Stefan M. Wild

In recent years, the study of coupled excitable oscillators has largely benefited from a new analytical technique developed by Ott and Antonsen. This technique allows to express the dynamics of certain macroscopic observable in the ensemble…

Adaptation and Self-Organizing Systems · Physics 2019-02-19 Gonzalo Uribarri , Gabriel B. Mindlin

Propagation of oscillatory signals through the cortex and coherence is shaped by the connectivity structure of neuronal circuits. This study systematically investigates the network and stimulus properties that shape network responses. The…

Neurons and Cognition · Quantitative Biology 2017-04-28 Hannah Bos , Jannis Schücker , Moritz Helias

Today's robots are increasingly interacting with people and need to efficiently learn inexperienced user's preferences. A common framework is to iteratively query the user about which of two presented robot trajectories they prefer. While…

Robotics · Computer Science 2021-10-04 Nils Wilde , Erdem Bıyık , Dorsa Sadigh , Stephen L. Smith

The Social Force Model is one of the most prominent models of pedestrian dynamics. As such naturally much discussion and criticism has spawned around it, some of which concerns the existence of oscillations in the movement of pedestrians.…

Physics and Society · Physics 2015-07-10 Tobias Kretz

Elements of neural networks, both biological and artificial, can be described by their selectivity for specific cognitive features. Understanding these features is important for understanding the inner workings of neural networks. For a…

Neural and Evolutionary Computing · Computer Science 2026-04-28 Nikita Pospelov , Andrei Chertkov , Maxim Beketov , Ivan Oseledets , Konstantin Anokhin

Neuroscience research has produced many theories and computational neural models of sensory nervous systems. Notwithstanding many different perspectives towards developing intelligent machines, artificial intelligence has ultimately been…

Artificial Intelligence · Computer Science 2017-10-05 David Di Giorgio

Many systems are modulated by unknown slow processes. This hinders analysis in highly non-linear systems, such as excitable systems. We show that for such systems, if the input matches the sparse `spiky' nature of the output, the spiking…

Neurons and Cognition · Quantitative Biology 2014-05-01 Daniel Soudry , Ron Meir

The relationship between complex, brain oscillations and the dynamics of individual neurons is poorly understood. Here we utilize Maximum Caliber, a dynamical inference principle, to build a minimal, yet general model of the collective…

Neurons and Cognition · Quantitative Biology 2020-09-04 Corey Weistuch , Lilianne R. Mujica-Parodi , Ken Dill

The adaptive fitness of an organism in its ecological niche is highly reliant upon its ability to associate an environmental or internal stimulus with a behavior response through reinforcement. This simple but powerful observation has been…

Neurons and Cognition · Quantitative Biology 2023-12-01 Roy E. Clymer , Sanjeev V. Namjoshi

Periodic neural activity not locked to the stimulus or to motor responses is usually ignored. Here, we present new tools for modeling and quantifying the information transmission based on periodic neural activity that occurs with…

Neurons and Cognition · Quantitative Biology 2008-12-05 Kilian Koepsell , Friedrich T. Sommer

Spiking Neural Networks have earned increased recognition in recent years owing to their biological plausibility and event-driven computation. Spiking neurons are the fundamental building components of Spiking Neural Networks. Those neurons…

Neural and Evolutionary Computing · Computer Science 2025-06-04 Amr Nabil , T. Nandha Kumar , Haider Abbas F. Almurib

Ring attractors, mathematical models inspired by neural circuit dynamics, provide a biologically plausible mechanism to improve learning speed and accuracy in Reinforcement Learning (RL). Serving as specialized brain-inspired structures…

Machine Learning · Computer Science 2025-10-27 Marcos Negre Saura , Richard Allmendinger , Wei Pan , Theodore Papamarkou

We numerically demonstrate a network of coupled oscillators that can learn to solve a classification task from a set of examples -- performing both training and inference through the nonlinear evolution of the system. We accomplish this by…

Mesoscale and Nanoscale Physics · Physics 2026-01-07 Daan de Bos , Marc Serra-Garcia

The structure of a genetic network is uncovered by studying its response to external stimuli (input signals). We present a theory of propagation of an input signal through a linear stochastic genetic network. It is found that there are…

Molecular Networks · Quantitative Biology 2009-11-11 Ovidiu Lipan , Wing H. Wong
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