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We present a study of exclusion processes on networks as models for complex transport phenomena and in particular for active transport of motor proteins along the cytoskeleton. We argue that active transport processes on networks…
Dynamics with a threshold input--output relation commonly exist in gene, signal-transduction, and neural networks. Coupled dynamical systems of such threshold elements are investigated, in an effort to find differentiation of elements…
Totally asymmetric exclusion processes (TASEP) with open boundaries are known to exhibit moving shocks or delocalised domain walls (DDW) for sufficiently small equal injection and extraction rates. In contrast TASEPs in an inhomogeneous…
We extend one dimensional asymmetric simple exclusion process (ASEP) to a surface and show that the effect of transverse diffusion is to induce a continuous phase transition from a constant density phase to a maximal current phase as the…
We consider the totally asymmetric simple exclusion process (TASEP) on the periodic chain in the presence of a single impurity site that is inaccessible to other particles and therefore acts as a static defect. Particles are allowed to…
In many important cellular processes, including mRNA translation, gene transcription, phosphotransfer, and intracellular transport, biological "particles" move along some kind of "tracks". The motion of these particles can be modeled as a…
We develop a power series method for the nonequilibrium steady state of the inhomogeneous one-dimensional totally asymmetric simple exclusion process (TASEP) in contact with two particle reservoirs and with site-dependent hopping rates in…
We investigate the totally asymmetric simple exclusion process (TASEP) in the presence of a bottleneck, i.e. a sequence of consecutive defect sites with reduced hopping rate. The influence of such a bottleneck on the phase diagram is…
A two-lane exclusion process is studied where particles move in the two lanes in opposite directions and are able to change lanes. The focus is on the steady state behavior in situations where a positive current is constrained to an…
Using the framework of generalized exclusion processes we study mixtures of passive and active particles interacting by steric repulsion. The particles move in a pore with periodically modulated aperture, which is modeled by a…
We propose a misanthrope process, defined on a ring, which realizes the totally asymmetric simple exclusion process with open boundaries. In the misanthrope process, particles have no exclusion interactions in contrast to those in the…
We study an interacting particle process on a finite ring with $L$ sites with at most $K$ particles per site, in which particles hop to nearest neighbors with rates given in terms of $t$-deformed integers and asymmetry parameter $q$, where…
We investigate the effect of quenched spatial disordered hopping rates on the characteristics of the asymmetric simple exclusion process (ASEP) with open boundaries both numerically and by extensive simulations. Disorder averages of the…
We consider the asymmetric simple exclusion processes (ASEP) on a ring constrained to produce an atypically large flux, or an extreme activity. Using quantum free fermion techniques we find the time-dependent conditional transition…
We revisit the slow-bond (SB) problem of the one-dimensional (1D) totally asymmetric simple exclusion process (TASEP) with modified hopping rates. In the original SB problem, it turns out that a local defect is always relevant to the system…
The Symmetric Exclusion Process (SEP), in which particles hop symmetrically on a discrete line with hard-core constraints, is a paradigmatic model of subdiffusion in confined systems. This anomalous behavior is a direct consequence of…
The asymmetric simple exclusion process (ASEP) is an important model from statistical physics describing particles that hop randomly from one site to the next along an ordered lattice of sites, but only if the next site is empty. ASEP has…
In the multi-type totally asymmetric simple exclusion process (TASEP) on the line, each site of Z is occupied by a particle labeled with some number, and two neighboring particles are interchanged at rate one if their labels are in…
The effect of a moving defect particle for the one-dimensional partially asymmetric simple exclusion process on a ring is considered. The current of the ordinary particles, the speed of the defect particle and the density profile of the…
We consider an extension of the zero-range process to the case where the hop rate depends on the state of both departure and arrival sites. We recover the misanthrope and the target process as special cases for which the probability of the…