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The equilibrium structure and dynamics of a single polymer chain in a thermal solvent is by now well-understood in terms of scaling laws. Here we consider a polymer in a bacterial bath, i.e. in a solvent consisting of active particles which…

Soft Condensed Matter · Physics 2014-07-29 Andreas Kaiser , Hartmut Löwen

We report grand canonical Monte Carlo simulations of the critical point properties of homopolymers within the Bond Fluctuation model. By employing Configurational Bias Monte Carlo methods, chain lengths of up to N=60 monomers could be…

Condensed Matter · Physics 2009-10-28 N. B. Wilding , M. Mueller , K. Binder

Polymers exposed to shear flow exhibit a rich tumbling dynamics. While rigid rods rotate on Jeffery orbits, flexible polymers stretch and coil up during tumbling. Theoretical results show that in both of these asymptotic regimes the…

Soft Condensed Matter · Physics 2014-05-27 Philipp S. Lang , Benedikt Obermayer , Erwin Frey

This is the third paper in a series analyzing the asymptotic distribution of the phase shifts in the semiclassical limit. We analyze the distribution of phase shifts, or equivalently, eigenvalues of the scattering matrix, $S_h(E)$, for…

Analysis of PDEs · Mathematics 2015-09-14 Jesse Gell-Redman , Andrew Hassell

We obtain the entropy of flexible linear chains composed of M monomers placed on the square lattice using a transfer matrix approach. An excluded volume interaction is included by considering the chains to be self-and mutually avoiding, and…

Statistical Mechanics · Physics 2009-11-07 W. G. Dantas , J. F. Stilck

We present a perturbative approach to disordered systems in one spatial dimension that accesses the full range of phase disorder and clarifies the connection between localization and phase information. We consider a long chain of…

Disordered Systems and Neural Networks · Physics 2024-03-04 Adrian B. Culver , Pratik Sathe , Rahul Roy

We analyse the conformational behaviour of a linear semiflexible homo-polymer chain confined by two geometrical constraints under a good solvent condition in two dimensions. The constraints are stair shaped impenetrable surfaces. The…

Soft Condensed Matter · Physics 2014-07-14 Pramod Kumar Mishra

We study the dynamical properties of semiflexible polymers with a recently introduced bead-spring model. We focus on double-stranded DNA. The two parameters of the model, $T^*$ and $\nu$, are chosen to match its experimental force-extension…

Soft Condensed Matter · Physics 2014-11-07 Gerard T. Barkema , Debabrata Panja , J. M. J. van Leeuwen

Mesh-like structures, such as mucus gel or cytoskeleton networks, are ubiquitous in biological systems. These intricate structures are composed of cross-linked, semi-flexible bio-filaments, crucial to numerous biological processes. In many…

Soft Condensed Matter · Physics 2024-01-10 Yeongjin Kim , Won Kyu Kim , Jae-Hyung Jeon

Wetting and drying phenomena are studied for flexible and semiflexible polymer solutions via coarse-grained molecular dynamics simulations and density functional theory calculations. The study is based on the use of Young's equation for the…

Soft Condensed Matter · Physics 2022-02-16 Jiarul Midya , Sergei A. Egorov , Kurt Binder , Arash Nikoubashman

A polymer chain containing $N$ monomers confined in a finite cylindrical tube of diameter $D$ grafted at a distance $L$ from the open end of the tube may undergo a rather abrupt transition, where part of the chain escapes from the tube to…

Soft Condensed Matter · Physics 2009-11-13 Hsiao-Ping Hsu , Kurt Binder , Leonid I. Klushin , Alexander M. Skvortsov

We present an exact and Monte Carlo renormalization group (MCRG) study of semiflexible polymer chains on an infinite family of the plane-filling (PF) fractals. The fractals are compact, that is, their fractal dimension $d_f$ is equal to 2…

Statistical Mechanics · Physics 2013-05-29 Ivan Zivic , Suncica Elezovic-Hadzic , Sava Milosevic

Due to the complex characteristics of bottle-brush polymers, it became a challenge to develop an efficient algorithm for studying such macromolecules under various solvent conditions or some constraints in the space by using computer…

Soft Condensed Matter · Physics 2011-07-08 Hsiao-Ping Hsu

We introduce a fast implementation of the pivot algorithm for self-avoiding walks, which we use to obtain large samples of walks on the cubic lattice of up to $33 \times 10^6$ steps. Consequently the critical exponent $\nu$ for…

Statistical Mechanics · Physics 2010-02-03 Nathan Clisby

We aim to describe a droplet bouncing on a vibrating bath using a simple and highly versatile model inspired from quantum mechanics. Close to the Faraday instability, a long-lived surface wave is created at each bounce, which serves as a…

The low-energy effective theory description of a confining theory, such as QCD, is constructed including local interactions between hadrons organized in a derivative expansion. This kind of approach also applies more generically to theories…

High Energy Physics - Theory · Physics 2020-11-09 Carlos Hoyos , Niko Jokela , Daniel Logares

We investigate current fluctuations in non-degenerate semiconductors, on length scales intermediate between the elastic and inelastic mean free paths. We present an exact solution of the non-linear kinetic equations in the regime of…

Mesoscale and Nanoscale Physics · Physics 2007-05-23 H. Schomerus , E. G. Mishchenko , C. W. J. Beenakker

We consider the repulsive Vlasov-Poisson system in dimension $d \geq 4$. A sufficient condition on the decay rate of the associated electric field is presented that guarantees the scattering and determination of the complete asymptotic…

Analysis of PDEs · Mathematics 2023-06-08 Stephen Pankavich

We calculate structure functions at small $x$ both under the assumption of a hard singularity (a power behaviour $x^{-\lambda}, \lambda$ positive, for $x\rightarrow 0$) or that of a soft-Pomeron dominated behaviour, also called double…

High Energy Physics - Phenomenology · Physics 2016-09-06 K. Adel , F. Barreiro , F. J. Ynduráin

Synthetic copolymers and biopolymers, such as polypeptides and double-stranded DNA, often exhibit strong variations in bending stiffness along their contour, which can significantly impact conformational behavior at larger scales. To…

Soft Condensed Matter · Physics 2025-11-04 Yannick Witzky , Friederike Schmid , Arash Nikoubashman
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