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The participation coefficient is a widely used metric of the diversity of a node's connections with respect to a modular partition of a network. An information-theoretic formulation of this concept of connection diversity, referred to here…

Physics and Society · Physics 2023-07-25 Pavle Cajic , Dominic Agius , Oliver M. Cliff , James M. Shine , Joseph T. Lizier , Ben D. Fulcher

Enhanced sampling methods typically require predefined collective variables (CVs) that presuppose knowledge of reaction coordinates, restricting the discovery of unanticipated transition mechanisms or intermediates. Here, we show that a…

Chemical Physics · Physics 2026-04-08 Xiangrui Li , Daniel Schwalbe-Koda

Information theory is a mathematical theory of learning with deep connections with topics as diverse as artificial intelligence, statistical physics, and biological evolution. Many primers on information theory paint a broad picture with…

Information Theory · Computer Science 2019-03-26 Philip Chodrow

The representations of conditional entropy and conditional mutual information are significant in explaining the unique effects among variables. While previous studies based on conditional contrastive sampling have effectively removed…

Machine Learning · Computer Science 2025-01-07 Keng Hou Leong , Yuxuan Xiu , Wai Kin , Chan

Understanding a complex system entails capturing the non-trivial collective phenomena that arise from interactions between its different parts. Information theory is a flexible and robust framework to study such behaviours, with several…

We propose a new way of investigating phase transitions in the context of information theory. We use an information-entropic measure of spatial complexity known as configurational entropy (CE) to quantify both the storage and exchange of…

Statistical Mechanics · Physics 2018-03-23 Damian Sowinski , Marcelo Gleiser

Organisms have evolved immune systems that can counter pathogenic threats. The adaptive immune system in vertebrates consists of a diverse repertoire of immune receptors that can dynamically reorganize to specifically target the…

Populations and Evolution · Quantitative Biology 2024-10-29 Quinn N Bellamy , Zachary Montague , Luca Peliti , Armita Nourmohammad

The principle of maximum entropy is a broadly applicable technique for computing a distribution with the least amount of information possible while constrained to match empirically estimated feature expectations. However, in many real-world…

Machine Learning · Computer Science 2022-08-16 Kenneth Bogert , Yikang Gui , Prashant Doshi

Biologists measure information in different ways. Neurobiologists and researchers in bioinformatics often measure information using information-theoretic measures such as Shannon's entropy or mutual information. Behavioral biologists and…

Populations and Evolution · Quantitative Biology 2007-07-13 Carl T. Bergstrom , Michael Lachmann

Inference and learning are commonly cast in terms of optimisation, yet the fundamental constraints governing uncertainty reduction remain unclear. This work presents a first-principles framework inherent to Bayesian updating, termed…

Information Theory · Computer Science 2026-01-22 Takuya Isomura

Feed-forward deep neural networks have been used extensively in various machine learning applications. Developing a precise understanding of the underling behavior of neural networks is crucial for their efficient deployment. In this paper,…

Information Theory · Computer Science 2016-03-22 Pejman Khadivi , Ravi Tandon , Naren Ramakrishnan

Distributed systems, such as biological and artificial neural networks, process information via complex interactions engaging multiple subsystems, resulting in high-order patterns with distinct properties across scales. Investigating how…

Information Theory · Computer Science 2025-04-23 Aaron J. Gutknecht , Fernando E. Rosas , David A. Ehrlich , Abdullah Makkeh , Pedro A. M. Mediano , Michael Wibral

While most useful information theoretic inequalities can be deduced from the basic properties of entropy or mutual information, up to now Shannon's entropy power inequality (EPI) is an exception: Existing information theoretic proofs of the…

Information Theory · Computer Science 2016-11-17 Olivier Rioul

In the paper the memory effect in the system consisting from a trajectory of process and an environment is considered. The environment is presented by scalar potential and noise. The evolution of system is interpreted as process of the…

General Physics · Physics 2008-01-28 Maxim Budaev

While frameworks based on physical grounds (like the Drift-Diffusion Model) have been exhaustively used in psychology and neuroscience to describe perceptual decision-making in humans, analogous approaches for more complex situations like…

Physics and Society · Physics 2022-12-19 Javier Cristín , Vicenç Méndez , Daniel Campos

The characterisation of information processing is an important task in complex systems science. Information dynamics is a quantitative methodology for modelling the intrinsic information processing conducted by a process represented as a…

Information Theory · Computer Science 2018-08-01 Richard E. Spinney , Joseph T. Lizier

We study an opinion formation model by the means of a co-evolving complex network where the vertices represent the individuals, characterised by their evolving opinions, and the edges represent the interactions among them. The network…

Physics and Society · Physics 2015-06-19 Enrique Burgos , Laura Hernandez , Horacio Ceva , Roberto P. J. Perazzo

Statistical properties of coupled dynamic-stochastic systems are studied within a combination of the maximum information principle and the superstatistical approach. The conditions at which the Shannon entropy functional leads to a…

Statistical Mechanics · Physics 2009-11-11 E. V. Vakarin , J. P. Badiali

Collective behaviour is known to be the result of diverse dynamics and is sometimes likened to a living system. Although many studies have revealed the dynamics of various collective behaviours, their main focus was on the information…

The problems of causality, modeling, and control for chaotic, high-dimensional dynamical systems are formulated in the language of information theory. The central quantity of interest is the Shannon entropy, which measures the amount of…

Dynamical Systems · Mathematics 2022-06-01 Adrián Lozano-Durán , Gonzalo Arranz