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The inference of the evolutionary history of a collection of organisms is a problem of fundamental importance in evolutionary biology. The abundance of DNA sequence data arising from genome sequencing projects has led to significant…

Populations and Evolution · Quantitative Biology 2015-07-07 Julia Chifman , Laura Kubatko

Estimation of covariance matrices is a fundamental problem in multivariate statistics. Recently, growing efforts have focused on incorporating covariate effects into these matrices, facilitating subject-specific estimation. Despite these…

Methodology · Statistics 2026-04-10 Rakheon Kim , Emma Jingfei Zhang

We introduce a new family of copula densities constructed from univariate distributions on $[0,1]$. Although our construction is structurally simple, the resulting family is versatile: it includes both smooth and irregular examples, and…

Statistics Theory · Mathematics 2025-10-01 Michaël Lalancette , Robert Zimmerman

In genetic association studies, detecting phenotype-genotype association is a primary goal. We assume that the relationship between the data -phenotype, genetic markers and environmental covariates - can be modelled by a generalized linear…

Methodology · Statistics 2020-04-13 K. K. Halle , Ø. Bakke , S. Djurovic , A. Bye , E. Ryeng , U. Wisløff , O. A. Andreassen , M. Langaas

Randomness is one of the important key concepts of statistics. In epidemiology or medical science, we investigate our hypotheses and interpret results through this statistical randomness. We hypothesized by imposing some conditions to this…

Methodology · Statistics 2020-02-11 T. Usuzaki , M. Shimoyama S. Chiba , S. Hotta

Variable selection is of increasing importance to address the difficulties of high dimensionality in many scientific areas. In this paper, we demonstrate a property for distance covariance, which is incorporated in a novel feature screening…

Methodology · Statistics 2014-09-03 Jing Kong , Sijian Wang , Grace Wahba

We analyse the statistical properties of genealogical trees in a neutral model of a closed population with sexual reproduction and non-overlapping generations. By reconstructing the genealogy of an individual from the population evolution,…

Condensed Matter · Physics 2009-10-31 Bernard Derrida , Susanna C. Manrubia , Damian H. Zanette

Estimating heritability remains a significant challenge in statistical genetics. Diverse approaches have emerged over the years that are broadly categorized as either random effects or fixed effects heritability methods. In this work, we…

Methodology · Statistics 2024-06-18 Yanke Song , Xihong Lin , Pragya Sur

When a sample frequency table is published, disclosure risk arises when some individuals can be identified on the basis of their values in certain attributes in the table called key variables, and then their values in other attributes may…

Methodology · Statistics 2009-09-29 Yosef Rinott , Natalie Shlomo

Network science explores intricate connections among objects, employed in diverse domains like social interactions, fraud detection, and disease spread. Visualization of networks facilitates conceptualizing research questions and forming…

Social and Information Networks · Computer Science 2024-01-11 Octavious Smiley , Till Hoffmann , Jukka-Pekka Onnela

Analyzing large samples of high-dimensional data under dependence is a challenging statistical problem as long time series may have change points, most importantly in the mean and the marginal covariances, for which one needs valid tests.…

Methodology · Statistics 2022-11-07 Fabian Mies , Ansgar Steland

The salient properties of large empirical covariance and correlation matrices are studied for three datasets of size 54, 55 and 330. The covariance is defined as a simple cross product of the returns, with weights that decay logarithmically…

Statistical Finance · Quantitative Finance 2009-03-10 Gilles Zumbach

The problem of covariance estimation for replicated surface-valued processes is examined from the functional data analysis perspective. Considerations of statistical and computational efficiency often compel the use of separability of the…

Methodology · Statistics 2021-10-25 Tomas Masak , Victor M. Panaretos

The number of models shared online has recently skyrocketed, with over one million public models available on Hugging Face. Sharing models allows other users to build on existing models, using them as initialization for fine-tuning,…

Machine Learning · Computer Science 2025-04-16 Eliahu Horwitz , Asaf Shul , Yedid Hoshen

As a result of the recent popularity of social networks and the increase in the number of research papers published across all fields, attributed networks consisting of relationships between objects, such as humans and the papers, that have…

Social and Information Networks · Computer Science 2020-10-15 Yuta Yajima , Akihiro Inokuchi

We introduce a new ensemble of random bipartite graphs, which we term the `smearing ensemble', where each left node is connected to some number of consecutive right nodes. Such graphs arise naturally in the recovery of sparse wavelet…

Information Theory · Computer Science 2017-05-09 Kabir Chandrasekher , Orhan Ocal , Kannan Ramchandran

Sequential recommendation (SR) models the dynamic user preferences and generates the next-item prediction as the affinity between the sequence and items, in a joint latent space with low dimensions (i.e., the sequence and item embedding…

Information Retrieval · Computer Science 2024-07-22 Ziwei Fan , Zhiwei Liu , Hao Peng , Philip S. Yu

Whole and targeted sequencing of human genomes is a promising, increasingly feasible tool for discovering genetic contributions to risk of complex diseases. A key step is calling an individual's genotype from the multiple aligned short read…

Applications · Statistics 2012-06-29 Baiyu Zhou , Alice S. Whittemore

Causal inference is essential for data-driven decision-making, as it aims to uncover causal relationships from observational data. However, identifying causality remains challenging due to the potential for confounding and the distinction…

Machine Learning · Statistics 2026-05-08 Tianyu Yang , Md. Noor-E-Alam

Filtering and smoothing algorithms for linear discrete-time state-space models with skew-t distributed measurement noise are presented. The proposed algorithms improve upon our earlier proposed filter and smoother using the mean field…

Systems and Control · Computer Science 2016-03-22 Henri Nurminen , Tohid Ardeshiri , Robert Piche , Fredrik Gustafsson
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