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The longest common subsequence (LCS) is a fundamental problem in string processing which has numerous algorithmic studies, extensions, and applications. A sequence $u_1, \ldots, u_f$ of $f$ strings s said to be an ($f$-)segmentation of a…

Data Structures and Algorithms · Computer Science 2025-02-27 Yuki Yonemoto , Takuya Mieno , Shunsuke Inenaga , Ryo Yoshinaka , Ayumi Shinohara

This paper reformulates the problem of finding a longest common increasing subsequence of the two given input sequences in a very succinct way. An extremely simple linear space algorithm based on the new formula can find a longest common…

Data Structures and Algorithms · Computer Science 2016-08-26 Daxin Zhu , Lei Wang , Tinran Wang , Xiaodong Wang

The {\em longest common subsequence (LCS)} problem is a classic and well-studied problem in computer science. Palindrome is a word which reads the same forward as it does backward. The {\em longest common palindromic subsequence (LCPS)}…

Data Structures and Algorithms · Computer Science 2011-10-25 Shihabur Rahman Chowdhury , Md. Mahbubul Hasan , Sumaiya Iqbal , M. Sohel Rahman

One of the most fundamental method for comparing two given strings $A$ and $B$ is the longest common subsequence (LCS), where the task is to find (the length) of an LCS of $A$ and $B$. In this paper, we deal with the STR-IC-LCS problem…

Data Structures and Algorithms · Computer Science 2024-05-21 Yuki Yonemoto , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai

We propose efficient algorithms for enumerating maximal common subsequences (MCSs) of two strings. Efficiency of the algorithms are estimated by the preprocessing-time, space, and delay-time complexities. One algorithm prepares a…

Data Structures and Algorithms · Computer Science 2023-07-21 Miyuji Hirota , Yoshifumi Sakai

The recently introduced longest common substring with $k$-mismatches ($k$-LCF) problem is to find, given two sequences $S_1$ and $S_2$ of length $n$ each, a longest substring $A_1$ of $S_1$ and $A_2$ of $S_2$ such that the Hamming distance…

Data Structures and Algorithms · Computer Science 2014-10-15 Szymon Grabowski

Given $m$ documents of total length $n$, we consider the problem of finding a longest string common to at least $d \geq 2$ of the documents. This problem is known as the \emph{longest common substring (LCS) problem} and has a classic $O(n)$…

Data Structures and Algorithms · Computer Science 2014-07-03 Tomasz Kociumaka , Tatiana Starikovskaya , Hjalte Wedel Vildhøj

Given a set of $k$ strings $I$, their longest common subsequence (LCS) is the string with the maximum length that is a subset of all the strings in $I$. A data-structure for this problem preprocesses $I$ into a data-structure such that the…

Data Structures and Algorithms · Computer Science 2021-01-13 Sepideh Aghamolaei

The Longest Common Increasing Subsequence (LCIS) is a variant of the classical Longest Common Subsequence (LCS), in which we additionally require the common subsequence to be strictly increasing. While the well-known "Four Russians"…

Data Structures and Algorithms · Computer Science 2020-03-31 Anadi Agrawal , Paweł Gawrychowski

The Longest Common Subsequence (LCS) problem is a very important problem in math- ematics, which has a broad application in scheduling problems, physics and bioinformatics. It is known that the given two random sequences of infinite…

Discrete Mathematics · Computer Science 2013-06-19 Kang Ning , Kwok Pui Choi

We study sketching and streaming algorithms for the Longest Common Subsequence problem (LCS) on strings of small alphabet size $|\Sigma|$. For the problem of deciding whether the LCS of strings $x,y$ has length at least $L$, we obtain a…

Data Structures and Algorithms · Computer Science 2018-10-03 Karl Bringmann , Bhaskar Ray Chaudhury

In this note, we first introduce a new problem called the longest common subsequence and substring problem. Let $X$ and $Y$ be two strings over an alphabet $\Sigma$. The longest common subsequence and substring problem for $X$ and $Y$ is to…

Data Structures and Algorithms · Computer Science 2023-08-03 R. Li , J. Deka , K. Deka

The longest common substring with $k$-mismatches problem is to find, given two strings $S_1$ and $S_2$, a longest substring $A_1$ of $S_1$ and $A_2$ of $S_2$ such that the Hamming distance between $A_1$ and $A_2$ is $\le k$. We introduce a…

Data Structures and Algorithms · Computer Science 2015-04-08 Tomas Flouri , Emanuele Giaquinta , Kassian Kobert , Esko Ukkonen

We study quantum algorithms for several fundamental string problems, including Longest Common Substring, Lexicographically Minimal String Rotation, and Longest Square Substring. These problems have been widely studied in the stringology…

Data Structures and Algorithms · Computer Science 2021-10-22 Shyan Akmal , Ce Jin

Let us consider the Multiple String Matching Problem. In this problem, we consider a long string, denoted by $t$, of length $n$. This string is referred to as a text. We also consider a sequence of $m$ strings, denoted by $S$, which we…

Quantum Physics · Physics 2024-11-25 Kamil Khadiev , Danil Serov

This paper shows that a simple algorithm produces the {\em all-prefixes-LCSs-graph} in $O(mn)$ time for two input sequences of size $m$ and $n$. Given any prefix $p$ of the first input sequence and any prefix $q$ of the second input…

Data Structures and Algorithms · Computer Science 2011-03-09 Ronald I. Greenberg

Let $A$ and $B$ be two number sequences of length $n$ and $m$, respectively, where $m\le n$. Given a positive number $\delta$, a common almost increasing sequence $s_1\ldots s_k$ is a common subsequence for both $A$ and $B$ such that for…

Data Structures and Algorithms · Computer Science 2025-05-08 Md Tanzeem Rahat , Md. Manzurul Hasan , Debajyoti Mondal

Longest Common Subsequence ($LCS$) deals with the problem of measuring similarity of two strings. While this problem has been analyzed for decades, the recent interest stems from a practical observation that considering single characters is…

Data Structures and Algorithms · Computer Science 2018-05-25 Filip Pavetić , Ivan Katanić , Gustav Matula , Goran Žužić , Mile Šikić

The Longest Common Subsequence Problem (LCS) deals with finding the longest subsequence among a given set of strings. The LCS problem is an NP-hard problem which makes it a target for lots of effort to find a better solution with heuristics…

Data Structures and Algorithms · Computer Science 2022-06-24 Alireza Abdi , Mohsen Hooshmand

Given a string $T$ with length $n$ whose characters are drawn from an ordered alphabet of size $\sigma$, its longest Lyndon subsequence is a longest subsequence of $T$ that is a Lyndon word. We propose algorithms for finding such a…

Data Structures and Algorithms · Computer Science 2022-01-19 Hideo Bannai , Tomohiro I , Tomasz Kociumaka , Dominik Köppl , Simon J. Puglisi