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Small Angle Scattering (SAS) of X-rays or neutrons is an experimental technique that provides valuable structural information for biological macromolecules under physiological conditions and with no limitation on the molecular size. In…

Biomolecules · Quantitative Biology 2013-06-11 Konstantin Berlin , Nail A. Gumerov , Ramani Duraiswami , David Fushman

Since May 1, 2010, we have been able to study (almost) continuously the vector magnetic field in the Sun, thanks to two space-based observatories: the Solar Dynamics Observatory (SDO) and Hinode. Both are equipped with instruments able to…

Solar and Stellar Astrophysics · Physics 2018-01-24 Alberto Sainz Dalda

Computed Tomography (CT) is a key 3D imaging technology that fundamentally relies on the compute-intense back-projection operation to generate 3D volumes. GPUs are typically used for back-projection in production CT devices. However, with…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-04-28 Peng Chen , Mohamed Wahib , Xiao Wang , Shinichiro Takizawa , Takahiro Hirofuchi , Hirotaka Ogawa , Satoshi Matsuoka

Machine learning algorithms are becoming increasingly prevalent and performant in the reconstruction of events in accelerator-based neutrino experiments. These sophisticated algorithms can be computationally expensive. At the same time, the…

Inverse molecular design, i.e., designing molecules with specific target properties, can be posed as an optimization problem. High-dimensional optimization tasks in the natural sciences are commonly tackled via population-based…

Neural and Evolutionary Computing · Computer Science 2021-08-17 AkshatKumar Nigam , Robert Pollice , Alan Aspuru-Guzik

Milne-Eddington (M-E) inversion codes for the radiative transfer equation are the most widely used tools to infer the magnetic field from observations of the polarization signals in photospheric and chromospheric spectral lines.…

Solar and Stellar Astrophysics · Physics 2014-12-03 J. M. Borrero , B. W. Lites , A. Lagg , R. Rezaei , M. Rempel

The answers to data assimilation questions can be expressed as path integrals over all possible state and parameter histories. We show how these path integrals can be evaluated numerically using a Markov Chain Monte Carlo method designed to…

Computational Physics · Physics 2015-05-27 John C. Quinn , Henry D. I. Abarbanel

The flexible flow shop scheduling problem is an NP-hard problem and it requires significant resolution time to find optimal or even adequate solutions when dealing with large size instances. Thus, this paper proposes a dual island genetic…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-03-27 Jia Luo , Didier El Baz

Finite element schemes based on discontinuous Galerkin methods possess features amenable to massively parallel computing accelerated with general purpose graphics processing units (GPUs). However, the computational performance of such…

Computational Physics · Physics 2016-04-20 Axel Modave , Amik St-Cyr , Tim Warburton

The Milne-Eddington approximation provides an analytic and simple solution to the radiative transfer equation. It can be easily implemented in inversion codes that are used to fit spectro-polarimetric observations to infer average values of…

Solar and Stellar Astrophysics · Physics 2022-03-23 A. J. Dorantes-Monteagudo , A. L. Siu-Tapia , C. Quintero Noda , D. Orozco Suárez

Principal component analysis (PCA) is a key statistical technique for multivariate data analysis. For large data sets the common approach to PCA computation is based on the standard NIPALS-PCA algorithm, which unfortunately suffers from…

Quantitative Methods · Quantitative Biology 2008-11-10 M. Andrecut

We investigate the concept of rendering production-style content with full path tracing in a data-distributed fashion -- that is, with multiple collaborating nodes and/or GPUs that each store only part of the model. In particular, we…

Graphics · Computer Science 2022-04-22 Ingo Wald , Steven G Parker

This paper presents a parallel genetic algorithm for generalised vertex cover problem (GVCP) using Hadoop Map-Reduce framework. The proposed Map-Reduce implementation helps to run the genetic algorithm for generalized vertex cover problem…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-12-01 Drona Pratap Chandu

We present a pipeline that allows recovering reliable information for all four Stokes parameters with high accuracy. Its novelty relies on the treatment of the instrumental effects already prior to the computation of the Stokes parameters…

Instrumentation and Methods for Astrophysics · Physics 2018-01-10 I. Myserlis , E. Angelakis , A. Kraus , C. A. Liontas , N. Marchili , M. F. Aller , H. D. Aller , V. Karamanavis , L. Fuhrmann , T. P. Krichbaum , J. A. Zensus

Since the early 1970s, inversion techniques have become the most useful tool for inferring the magnetic, dynamic, and thermodynamic properties of the solar atmosphere. The intrinsic model dependence makes it necessary to formulate specific…

Solar and Stellar Astrophysics · Physics 2016-12-07 Jose Carlos del Toro Iniesta , Basilio Ruiz Cobo

For simple digital circuits, conventional method of designing circuits can easily be applied. But for complex digital circuits, the conventional method of designing circuits is not fruitfully applicable because it is time-consuming. On the…

Neural and Evolutionary Computing · Computer Science 2013-04-10 S. M. Ashik Eftekhar , Sk. Mahbub Habib , M. M. A. Hashem

As the need for computational power and efficiency rises, parallel systems become increasingly popular among various scientific fields. While multiple core-based architectures have been the center of attention for many years, the rapid…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-11 E. I. Ioannidis , N. Cheimarios , A. N. Spyropoulos , A. G. Boudouvis

Motion planning is an important and well-studied field of robotics. A typical approach to finding a route is to construct a {\em cell graph} representing a scene and then to find a path in such a graph. In this paper we present and analyze…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-03-23 Krzysztof Kaczmarski , Paweł Rzążewski , Albert Wolant

Current trends in parallel processors call for the design of efficient massively parallel algorithms for scientific computing. Parallel algorithms for Monte Carlo simulations of thermodynamic ensembles of particles have received little…

Computational Physics · Physics 2013-08-26 Joshua A. Anderson , Eric Jankowski , Thomas L. Grubb , Michael Engel , Sharon C. Glotzer

Based on the Meso-Structured Magnetic Atmosphere (MESMA) approximation, recently introduced by Carroll & Kopf (2007), we present first results of an inversion of spectropolarimetric observations obtained from solar internetwork regions. To…

Astrophysics · Physics 2007-05-23 T. A. Carroll