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We study the synchronization of coupled dynamical systems on a variety of networks. The dynamics is governed by a local nonlinear map or flow for each node of the network and couplings connecting different nodes via the links of the…

Chaotic Dynamics · Physics 2009-11-13 R. E. Amritkar , Sarika Jalan

We show that subsets of interacting oscillators may synchronize in different ways within a single network. This diversity of synchronization patterns is promoted by increasing the heterogeneous distribution of coupling weights and/or…

Pattern Formation and Solitons · Physics 2017-04-05 Daniel Malagarriga , Alessandro E. P. Villa , Jordi García-Ojalvo , Antonio J. Pons

We investigate numerically the collective dynamical behavior of pulse-coupled non-leaky integrate-and-fire-neurons that are arranged on a two-dimensional small-world network. To ensure ongoing activity, we impose a probability for…

Computational Physics · Physics 2012-02-15 Alexander Rothkegel , Klaus Lehnertz

Neural circuits comprise multiple interconnected regions, each with complex dynamics. The interplay between local and global activity is thought to underlie computational flexibility, yet the structure of multiregion neural activity and its…

Neurons and Cognition · Quantitative Biology 2025-01-09 David G. Clark , Manuel Beiran

Biological networks have evolved to be highly functional within uncertain environments while remaining extremely adaptable. One of the main contributors to the robustness and evolvability of biological networks is believed to be their…

Molecular Networks · Quantitative Biology 2008-02-14 Arend Hintze , Christoph Adami

Learning requires the traversal of inherently distinct cognitive states to produce behavioral adaptation. Yet, tools to explicitly measure these states with non-invasive imaging -- and to assess their dynamics during learning -- remain…

Self-organized bistability (SOB) is the counterpart of 'self-organized criticality' (SOC), for systems tuning themselves to the edge of bistability of a discontinuous phase transition, rather than to the critical point of a continuous one.…

Statistical Mechanics · Physics 2020-03-20 Victor Buendía , Serena di Santo , Pablo Villegas , Raffaella Burioni , Miguel A. Muñoz

Complex networks often exhibit emergent behaviors, where simple dyadic interactions yield collective dynamics that cannot be explained by examining the system's units individually or in pairs. Understanding how redundant and synergistic…

The space of possible behaviors complex biological systems may exhibit is unimaginably vast, and these systems often appear to be stochastic, whether due to variable noisy environmental inputs or intrinsically generated chaos. The brain is…

Neurons and Cognition · Quantitative Biology 2025-04-01 Jacob T. Crosser , Braden A. W. Brinkman

Inspired by empirical studies of networked systems such as the Internet, social networks, and biological networks, researchers have in recent years developed a variety of techniques and models to help us understand or predict the behavior…

Statistical Mechanics · Physics 2015-06-24 M. E. J. Newman

Recently, some studies started to unveil the wealthy of interactions that occur between groups of nodes when looking at the small scale of interactions taking place in complex networks. Such findings claim for a new systematic methodology…

Physics and Society · Physics 2016-07-26 Cesar H. Comin , João B. Bunoro , Matheus P. Viana , Luciano da F. Costa

Cellular decision-making (CDM) is a dynamic phenomenon often controlled by regulatory networks defining interactions between genes and transcription factor proteins. Traditional studies have focussed on molecular switches such as positive…

Molecular Networks · Quantitative Biology 2024-04-09 Akriti Srivastava , Mubasher Rashid

The structure of a bipartite interaction network can be described by providing a clustering for each of the two types of nodes. Such clusterings are outputted by fitting a Latent Block Model (LBM) on an observed network that comes from a…

Methodology · Statistics 2025-03-19 Emre Anakok , Pierre Barbillon , Colin Fontaine , Elisa Thebault

Starting from the concept of binary interactions between pairs of particles, a kinetic framework for the description of the action potential dynamics on a neural network is proposed. It consists of two coupled levels: the description of a…

Biological Physics · Physics 2023-03-21 Martina Conte , Maria Groppi , Andrea Tosin

The human brain has been studied at multiple scales, from neurons, circuits, areas with well defined anatomical and functional boundaries, to large-scale functional networks which mediate coherent cognition. In a recent work, we addressed…

Biological Physics · Physics 2012-05-17 Lazaros K. Gallos , Mariano Sigman , Hernan A. Makse

We investigate the equilibria of a random model network exhibiting extensive chaos. In this regime, a large number of equilibria is present. They are all saddles with low-dimensional unstable manifolds. Surprisingly, despite network's…

Disordered Systems and Neural Networks · Physics 2025-10-23 Xiaoyu Yang , Giancarlo La Camera , Gianluigi Mongillo

Many biological processes involve the action of molecular motors that interact with the cell cytoskeleton. Some processes, such as the transport of cargoes is achieved mainly by the action of individual motors. Other, such as cell motility…

Biological Physics · Physics 2011-03-25 Oded Farago , Anne Bernheim-Groswasser

A new complex network model is proposed which is founded on growth with new connections being established proportionally to the current dynamical activity of each node, which can be understood as a generalization of the Barabasi-Albert…

Physics and Society · Physics 2015-05-13 Lucas Antiqueira , Francisco Aparecido Rodrigues , Luciano da Fontoura Costa

Topological data analyses are rapidly turning into key tools for quantifying large volumes of neurobiological data, e.g., for organizing the spiking outputs of large neuronal ensembles and thus gaining insights into the information produced…

Neurons and Cognition · Quantitative Biology 2019-09-18 Yuri Dabaghian

In this work we challenge the main conclusions of Gu et al work (Controllability of structural brain networks. Nature communications 6, 8414, doi:10.1038/ncomms9414, 2015) on brain controllability. Using the same methods and analyses on…

Neurons and Cognition · Quantitative Biology 2018-07-10 Chengyi Tu , Rodrigo P. Rocha , Maurizio Corbetta , Sandro Zampieri , Marzo Zorzi , Samir Suweis
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