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The exponential family of random graphs is one of the most promising class of network models. Dependence between the random edges is defined through certain finite subgraphs, analogous to the use of potential energy to provide dependence…

Mathematical Physics · Physics 2015-06-11 Mei Yin

Generalized linear mixed-effects models (GLMMs) are widely used to analyze grouped and hierarchical data. In a GLMM, each response is assumed to follow an exponential-family distribution where the natural parameter is given by a linear…

Machine Learning · Statistics 2026-04-14 Yuli Slavutsky , Sebastian Salazar , David M. Blei

Semantic graphs, such as WordNet, are resources which curate natural language on two distinguishable layers. On the local level, individual relations between synsets (semantic building blocks) such as hypernymy and meronymy enhance our…

Computation and Language · Computer Science 2018-08-28 Yuval Pinter , Jacob Eisenstein

Machine-learning methods in biochemistry commonly represent molecules as graphs of pairwise intermolecular interactions for property and structure predictions. Most methods operate on a single graph, typically the minimal free energy (MFE)…

The microbiome constitutes a complex microbial ecology of interacting components that regulates important pathways in the host. Measurements of microbial abundances are key to learning the intricate network of interactions amongst microbes.…

Methodology · Statistics 2024-06-17 Veronica Vinciotti , Ernst Wit , Francisco Richter

Modeling networks can serve as a means of summarizing high-dimensional complex systems. Adapting an approach devised for dense, weighted networks, we propose a new method for generating and estimating unweighted networks. This approach can…

Physics and Society · Physics 2024-04-12 Benjamin Leinwand , Vince Lyzinski

Graphs are a powerful data structure for representing relational data and are widely used to describe complex real-world systems. Probabilistic Graphical Models (PGMs) and Graph Neural Networks (GNNs) can both leverage graph-structured…

Machine Learning · Statistics 2025-08-26 Michela Lapenna , Caterina De Bacco

The structure of large-scale social networks has predominantly been articulated using generative models, a form of average-case analysis. This chapter surveys recent proposals of more robust models of such networks. These models posit…

Data Structures and Algorithms · Computer Science 2020-08-03 Tim Roughgarden , C. Seshadhri

We introduce a Bayesian approach to conduct inferential analyses on dyadic data while accounting for interdependencies between observations through a set of additive and multiplicative effects (AME). The AME model is built on a generalized…

Applications · Statistics 2018-07-31 Shahryar Minhas , Peter D. Hoff , Michael D. Ward

A wide variety of complex networks (social, biological, information etc.) exhibit local clustering with substantial variation in the clustering coefficient (the probability of neighbors being connected). Existing models of large graphs…

Discrete Mathematics · Computer Science 2017-09-28 Samantha Petti , Santosh Vempala

Graph Neural Networks (GNNs) and their message passing framework that leverages both structural and feature information, have become a standard method for solving graph-based machine learning problems. However, these approaches still…

Machine Learning · Computer Science 2024-11-20 Simon Delarue , Thomas Bonald , Tiphaine Viard

Many dynamical systems can be successfully analyzed by representing them as networks. Empirically measured networks and dynamic processes that take place in these situations show heterogeneous, non-Markovian, and intrinsically correlated…

It is largely agreed that social network links are formed due to either homophily or social influence. Inspired by this, we aim at understanding the generation of links via providing a novel embedding-based graph formation model. Different…

Social and Information Networks · Computer Science 2024-11-08 Roshni G. Iyer , Yewen Wang , Wei Wang , Yizhou Sun

Randomized neural networks (NNs) are an interesting alternative to conventional NNs that are more used for data modeling. The random vector functional-link (RVFL) network is an established and theoretically well-grounded randomized learning…

Computation · Statistics 2018-04-24 Hien D. Nguyen , Dianhui Wang , Geoffrey J. McLachlan

Entity alignment which aims at linking entities with the same meaning from different knowledge graphs (KGs) is a vital step for knowledge fusion. Existing research focused on learning embeddings of entities by utilizing structural…

Artificial Intelligence · Computer Science 2020-12-16 Yao Zhu , Hongzhi Liu , Zhonghai Wu , Yingpeng Du

The Extreme Learning Machine (ELM) is a growing statistical technique widely applied to regression problems. In essence, ELMs are single-layer neural networks where the hidden layer weights are randomly sampled from a specific distribution,…

Machine Learning · Statistics 2025-07-31 Daniela De Canditiis , Fabiano Veglianti

Large real-life complex networks are often modeled by various random graph constructions and hundreds of further references therein. In many cases it is not at all clear how the modeling strength of differently generated random graph model…

Data Structures and Algorithms · Computer Science 2020-09-01 András Faragó , Rupei Xu

The graph structure is a commonly used data storage mode, and it turns out that the low-dimensional embedded representation of nodes in the graph is extremely useful in various typical tasks, such as node classification, link prediction ,…

Social and Information Networks · Computer Science 2020-08-03 Xing Li , Wei Wei , Xiangnan Feng , Xue Liu , Zhiming Zheng

We propose generalizations of a number of standard network models, including the classic random graph, the configuration model, and the stochastic block model, to the case of time-varying networks. We assume that the presence and absence of…

Social and Information Networks · Computer Science 2018-05-02 Xiao Zhang , Cristopher Moore , M. E. J. Newman

In recent years, machine learning has established itself as a powerful tool for high-resolution weather forecasting. While most current machine learning models focus on deterministic forecasts, accurately capturing the uncertainty in the…

Machine Learning · Computer Science 2024-10-29 Joel Oskarsson , Tomas Landelius , Marc Peter Deisenroth , Fredrik Lindsten