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The complexity of many biological, social and technological systems stems from the richness of the interactions among their units. Over the past decades, a great variety of complex systems has been successfully described as networks whose…

The origin of life occupies a very important place in the study of the evolution. Its liminal location between life and non-life poses special challenges to researchers who study this subject. Current approaches in studying the origin and…

History and Philosophy of Physics · Physics 2021-04-19 Gennady Shkliarevsky

Metabolic networks perform some of the most fundamental functions in living cells, including energy transduction and building block biosynthesis. While these are the best characterized networks in living systems, understanding their…

Molecular Networks · Quantitative Biology 2010-04-05 W. J. Riehl , P. L. Krapivsky , S. Redner , D. Segre

Artificial life is a research field studying what processes and properties define life, based on a multidisciplinary approach spanning the physical, natural and computational sciences. Artificial life aims to foster a comprehensive study of…

Artificial Intelligence · Computer Science 2023-08-02 Manuel Baltieri , Hiroyuki Iizuka , Olaf Witkowski , Lana Sinapayen , Keisuke Suzuki

We pursue research leading towards the nature of causality in the universe. We establish the equation of the universe's evolution from the universe-state function and its series expansion, in which causes and effects connect together to…

General Physics · Physics 2007-05-23 Nguyen Tuan Anh

Complex processes often arise from sequences of simpler interactions involving a few particles at a time. These interactions, however, may not be directly accessible to experiments. Here we develop the first efficient method for unravelling…

Quantum Physics · Physics 2022-06-24 Ge Bai , Ya-Dong Wu , Yan Zhu , Masahito Hayashi , Giulio Chiribella

The study of intelligent systems explains behaviour in terms of economic rationality. This results in an optimization principle involving a function or utility, which states that the system will evolve until the configuration of maximum…

Information Theory · Computer Science 2024-06-18 Pedro Hack

Various features of the development of individual living species, including individual humans, are programmed. Is death also programmed, and if yes, how is it implemented and what can be the underlying mechanism providing the inevitability…

Chaotic Dynamics · Physics 2019-05-23 Mark Edelman

Chirality or the property that distinguishes lefthandedness from righthandedness is an important aspect of the universe, starting from neutrinos, which are lefthanded. Fifteen years ago the author had proposed that life on the earth was…

General Physics · Physics 2009-11-01 Burra G. Sidharth

An origin is often an intriguing issue. It becomes doubly intriguing when the logical form of thinking is considered. In this paper we will investigate exactly that: we will conjecture on the origin of basic instruments of logical thinking.…

General Mathematics · Mathematics 2007-05-23 Valeriy K. Bulitko

Life has a special status, it even has its own science: biology. In many ways, the logic of life seems to differ from that of atoms, molecules, planets, or any other `inanimate object'. However, life is increasingly measured using…

Other Quantitative Biology · Quantitative Biology 2021-12-16 Marc-Antoine Fardin

Measures of information transfer have become a popular approach to analyze interactions in complex systems such as the Earth or the human brain from measured time series. Recent work has focused on causal definitions of information transfer…

Methodology · Statistics 2016-03-21 Jakob Runge

A perplexing problem in understanding physical reality is why the universe seems comprehensible, and correspondingly why there should exist physical systems capable of comprehending it. In this essay I explore the possibility that rather…

History and Philosophy of Physics · Physics 2015-11-10 Sara Imari Walker

How do organisms recognize their environment by acquiring knowledge about the world, and what actions do they take based on this knowledge? This article examines hypotheses about organisms' adaptation to the environment from machine…

Neurons and Cognition · Quantitative Biology 2019-03-01 Hideaki Shimazaki

Based on laboratory based growth of plant-like structures from inorganic materials, we present new theory for the emergence of plant structure at a range of scales dictated by levels of ionization (charge density), which can be traced…

General Physics · Physics 2017-01-24 Philip Turner , Laurent Nottale

I describe my path to unconventionality in my exploration of theoretical and applied aspects of computation towards revealing the algorithmic and reprogrammable properties and capabilities of the world, in particular related to applications…

General Literature · Computer Science 2017-06-28 Hector Zenil

We develop a quantum information protocol that models the biological behaviors of individuals living in a natural selection scenario. The artificially engineered evolution of the quantum living units shows the fundamental features of life…

Quantum Physics · Physics 2016-02-16 U. Alvarez-Rodriguez , M. Sanz , L. Lamata , E. Solano

We present a simple physical model that recapitulates several features of biological evolution, while being based only on thermally-driven attachment and detachment of elementary building blocks. Through its dynamics, this model samples a…

Populations and Evolution · Quantitative Biology 2025-07-11 Guy Bunin , Olivier Rivoire

With unprecedented advances in genetic engineering we are starting to see progressively more original examples of synthetic life. As such organisms become more common it is desirable to be able to distinguish between natural and artificial…

Other Computer Science · Computer Science 2016-11-28 Roman V. Yampolskiy

This paper discusses the benefits of describing the world as information, especially in the study of the evolution of life and cognition. Traditional studies encounter problems because it is difficult to describe life and cognition in terms…

Information Theory · Computer Science 2013-04-05 Carlos Gershenson
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