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Poisson-Boltzmann theory allows one to study soft matter and biophysical systems involving point-like charges of low valencies. The inclusion of fluctuation corrections beyond the mean-field approach typically requires the application of…

Soft Condensed Matter · Physics 2018-04-30 R. Blossey , A. C. Maggs

This work investigates the convergence of a domain decomposition method for the Poisson-Boltzmann model that can be formulated as an interior-exterior transmission problem. To study its convergence, we introduce an interior-exterior…

Numerical Analysis · Mathematics 2025-03-28 Xuanyu Liu , Yvon Maday , Chaoyu Quan , Hui Zhang

The large sparse linear systems arising from the finite element or finite difference discretization of elliptic PDEs can be solved directly via, e.g., nested dissection or multifrontal methods. Such techniques reorder the nodes in the grid…

Numerical Analysis · Mathematics 2013-02-26 Adrianna Gillman , Per-Gunnar Martinsson

We discuss the scalable parallel solution of the Poisson equation within a Particle-In-Cell (PIC) code for the simulation of electron beams in particle accelerators of irregular shape. The problem is discretized by Finite Differences.…

Computational Physics · Physics 2010-04-21 A. Adelmann , P. Arbenz , Y. Ineichen

Common efficient schemes for the incompressible Navier-Stokes equations, such as projection or fractional step methods, have limited temporal accuracy as a result of matrix splitting errors, or introduce errors near the domain boundaries…

Numerical Analysis · Mathematics 2015-05-20 David Shirokoff , Rodolfo Ruben Rosales

In this paper we study probabilistic and neural network approximations for solutions to Poisson equation subject to Holder data in general bounded domains of $\mathbb{R}^d$. We aim at two fundamental goals. The first, and the most…

Probability · Mathematics 2024-08-13 Lucian Beznea , Iulian Cimpean , Oana Lupascu-Stamate , Ionel Popescu , Arghir Zarnescu

This paper deals with a method for solving Poisson Equation (PE) based on genetic algorithms and grammatical evolution. The method forms generations of solutions expressed in an analytical form. Several examples of PE are tested and in most…

Neural and Evolutionary Computing · Computer Science 2014-01-03 Khalid Jebari , Mohammed Madiafi , Abdelaziz El Moujahid

Asymptotic expansion is constructed and justified for the solution to a nonuniform Neumann boundary-value problem for the Poisson equation with the right-hand side that depends both on longitudinal and transversal variables in a thin…

Analysis of PDEs · Mathematics 2013-04-30 Arsen V. Klevtsovskiy , Taras A. Mel'nyk

Solving the stationary nonlinear Fokker-Planck equations is important in applications and examples include the Poisson-Boltzmann equation and the two layer neural networks. Making use of the connection between the interacting particle…

Numerical Analysis · Mathematics 2023-10-03 Lei Li , Yijia Tang , Jingtong Zhang

An efficient solver for the three dimensional free-space Poisson equation is presented. The underlying numerical method is based on finite Fourier series approximation. While the error of all involved approximations can be fully controlled,…

Computational Physics · Physics 2017-10-18 Lukas Exl

The Poisson-Nernst-Planck (PNP) system is a standard model for describing ion transport. In many applications, e.g., ions in biological tissues, the presence of thin boundary layers poses both modelling and computational challenges. In a…

Biological Physics · Physics 2018-06-22 Zilong Song , Xiulei Cao , Huaxiong Huang

One of the major issues in the computational mechanics is to take into account the geometrical complexity. To overcome this difficulty and to avoid the expensive mesh generation, geometrically unfitted methods, i.e. the numerical methods…

Numerical Analysis · Mathematics 2021-10-12 Stephane Cotin , Michel Duprez , Vanessa Lleras , Alexei Lozinski , Killian Vuillemot

Many applications involve solving several boundary value problems on geometries that are local perturbations of an original geometry. The boundary integral equation for a problem on a locally perturbed geometry can be expressed as a low…

Numerical Analysis · Mathematics 2018-01-17 Yabin Zhang , Adrianna Gillman

This paper concerns the inclusion of Newton's method into an adaptive finite element method (FEM) for the solution of nonlinear partial differential equations (PDEs). It features an adaptive choice of the damping parameter in the Newton…

Numerical Analysis · Mathematics 2025-12-23 Philipp Bringmann , Maximilian Brunner , Dirk Praetorius

Partial differential equations (PDEs) are often computationally challenging to solve, and in many settings many related PDEs must be be solved either at every timestep or for a variety of candidate boundary conditions, parameters, or…

Machine Learning · Computer Science 2022-11-04 Tian Qin , Alex Beatson , Deniz Oktay , Nick McGreivy , Ryan P. Adams

In this paper, we effectively solve the inverse source problem of the fractional Poisson equation using MC-fPINNs. We construct two neural networks $ u_{NN}(x;\theta )$ and $f_{NN}(x;\psi)$ to approximate the solution $u^{*}(x)$ and the…

Numerical Analysis · Mathematics 2024-07-08 Rui Sheng , Peiying Wu , Jerry Zhijian Yang , Cheng Yuan

The problem of optimal mass transport arises in numerous applications including image registration, mesh generation, reflector design, and astrophysics. One approach to solving this problem is via the Monge-Amp\`ere equation. While recent…

Numerical Analysis · Mathematics 2012-03-02 Brittany D. Froese

We present an accelerated, or 'look-ahead' version of the Newton-Dinkelbach method, a well-known technique for solving fractional and parametric optimization problems. This acceleration halves the Bregman divergence between the current…

Data Structures and Algorithms · Computer Science 2021-05-24 Daniel Dadush , Zhuan Khye Koh , Bento Natura , László A. Végh

We propose a new fictitious domain finite element method, well suited for elliptic problems posed in a domain given by a level-set function without requiring a mesh fitting the boundary. To impose the Dirichlet boundary conditions, we…

Numerical Analysis · Mathematics 2019-07-09 Michel Duprez , Alexei Lozinski

A new computationally efficient method has been introduced to treat self-gravity in mesh based hydrodynamical simulations. It is applied simply by slightly modifying the Poisson equation into an inhomogeneous wave equation. This roughly…

Instrumentation and Methods for Astrophysics · Physics 2016-04-20 Ryosuke Hirai , Hiroki Nagakura , Hirotada Okawa , Kotaro Fujisawa
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