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This paper describes a new approach for learning structures of large Bayesian networks based on blocks resulting from feature space clustering. This clustering is obtained using normalized mutual information. And the subsequent aggregation…

Machine Learning · Statistics 2022-08-30 Anna V. Bubnova

We present a linked-cluster technique for calculating the distance of a quantum LDPC code. It offers an advantage over existing deterministic techniques for codes with small relative distances (which includes all known families of quantum…

Quantum Physics · Physics 2013-02-08 Alexey A. Kovalev , Ilya Dumer , Leonid P. Pryadko

We present a novel algorithm, called Links, designed to perform online clustering on unit vectors in a high-dimensional Euclidean space. The algorithm is appropriate when it is necessary to cluster data efficiently as it streams in, and is…

Machine Learning · Statistics 2018-01-31 Philip Andrew Mansfield , Quan Wang , Carlton Downey , Li Wan , Ignacio Lopez Moreno

The Atomic Cluster Expansion (ACE) (Drautz, Phys. Rev. B 99, 2019) has been widely applied in high energy physics, quantum mechanics and atomistic modeling to construct many-body interaction models respecting physical symmetries.…

Numerical Analysis · Mathematics 2024-01-08 Cheuk Hin Ho , Timon S. Gutleb , Christoph Ortner

We provide another approach to Friedland's result that the topological entropy $h$ of a symmetric nearest-neighbor subshift is computable. Instead of the previous algebraic technique, our approach is mostly combinatorial and involves only…

Dynamical Systems · Mathematics 2026-05-19 Vuong Bui

There are many clustering methods, such as hierarchical clustering method. Most of the approaches to the clustering of variables encountered in the literature are of hierarchical type. The great majority of hierarchical approaches to the…

Databases · Computer Science 2011-01-25 Rahmat Widia Sembiring , Jasni Mohamad Zain , Abdullah Embong

Dasgupta recently introduced a cost function for the hierarchical clustering of a set of points given pairwise similarities between them. He showed that this function is NP-hard to optimize, but a top-down recursive partitioning heuristic…

Data Structures and Algorithms · Computer Science 2016-10-03 Moses Charikar , Vaggos Chatziafratis

This paper presents a new, parallel implementation of clustering and demonstrates its utility in greatly speeding up the process of identifying homologous proteins. Clustering is a technique to reduce the number of comparison needed to find…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-08-29 Stuart Byma , Akash Dhasade , Adrian Altenhoff , Christophe Dessimoz , James R. Larus

We propose a simple and efficient clustering method for high-dimensional data with a large number of clusters. Our algorithm achieves high-performance by evaluating distances of datapoints with a subset of the cluster centres. Our…

Machine Learning · Computer Science 2022-03-30 Georgios Exarchakis , Omar Oubari , Gregor Lenz

We present massively parallel (MPC) algorithms and hardness of approximation results for computing Single-Linkage Clustering of $n$ input $d$-dimensional vectors under Hamming, $\ell_1, \ell_2$ and $\ell_\infty$ distances. All our…

Data Structures and Algorithms · Computer Science 2018-03-28 Grigory Yaroslavtsev , Adithya Vadapalli

In this article, we develop a clique-based method for social network clustering. We introduce a new index to evaluate the quality of clustering results, and propose an efficient algorithm based on recursive bipartition to maximize an…

Social and Information Networks · Computer Science 2018-05-11 Guang Ouyang , Dipak K. Dey , Panpan Zhang

Visual grouping is a key mechanism in human scene perception. There, it belongs to the subconscious, early processing and is key prerequisite for other high level tasks such as recognition. In this paper, we introduce an efficient, realtime…

Computer Vision and Pattern Recognition · Computer Science 2016-09-23 Dominik Alexander Klein , Dirk Schulz , Armin Bernd Cremers

The central problem in electronic structure theory is the computation of the eigenvalues of the electronic Hamiltonian -- an unbounded, self-adjoint operator acting on a Hilbert space of antisymmetric functions. Coupled cluster (CC)…

Numerical Analysis · Mathematics 2023-01-30 Muhammad Hassan , Yvon Maday , Yipeng Wang

We survey the existing techniques for calculating code distances of classical codes and apply these techniques to generic quantum codes. For classical and quantum LDPC codes, we also present a new linked-cluster technique. It reduces…

Quantum Physics · Physics 2014-05-05 Ilya Dumer , Alexey A. Kovalev , Leonid P. Pryadko

Algorithms for clustering points in metric spaces is a long-studied area of research. Clustering has seen a multitude of work both theoretically, in understanding the approximation guarantees possible for many objective functions such as…

Data Structures and Algorithms · Computer Science 2019-05-27 Maria-Florina Balcan , Travis Dick , Colin White

Spin models like the Heisenberg Hamiltonian effectively describe the interactions of open-shell transition-metal ions on a lattice and can account for various properties of magnetic solids and molecules. Numerical methods are usually…

Strongly Correlated Electrons · Physics 2025-06-24 Shadan Ghassemi Tabrizi , Thomas D. Kühne

We develop a network in which the natural numbers are the vertices. We use the decomposition of natural numbers by prime numbers to establish the connections. We perform data collapse and show that the degree distribution of these networks…

Statistical Mechanics · Physics 2009-11-10 Gilberto Corso

Connected clustering denotes a family of constrained clustering problems in which we are given a distance metric and an undirected connectivity graph $G$ that can be completely unrelated to the metric. The aim is to partition the $n$…

Data Structures and Algorithms · Computer Science 2025-11-25 Jan Eube , Heiko Röglin

Semi-supervised clustering is a basic problem in various applications. Most existing methods require knowledge of the ideal cluster number, which is often difficult to obtain in practice. Besides, satisfying the must-link constraints is…

Optimization and Control · Mathematics 2025-03-07 Wei Liu , Xin Liu , Michael K. Ng , Zaikun Zhang

We describe how to incorporate symmetries of the Hamiltonian into auxiliary-field quantum Monte Carlo calculations (AFQMC). Focusing on the case of Abelian symmetries, we show that the computational cost of most steps of an AFQMC…

Computational Physics · Physics 2019-07-24 Mario Motta , Shiwei Zhang , Garnet Kin-Lic Chan