Related papers: A refinement for ordered labeled trees
We consider extremal problems related to decks and multidecks of rooted binary trees (a.k.a. rooted phylogenetic tree shapes). Here, the deck (resp. multideck) of a tree $T$ refers to the set (resp. multiset) of leaf induced binary subtrees…
A semiorder is a partially ordered set $P$ with two certain forbidden induced subposets. This paper establishes a bijection between $n$-element semiorders of length $H$ and $(n+1)$-node ordered trees of height $H+1$. This bijection…
The {\em edit distance} between two ordered trees with vertex labels is the minimum cost of transforming one tree into the other by a sequence of elementary operations consisting of deleting and relabeling existing nodes, as well as…
Polytrees are a subclass of Bayesian networks that seek to capture the conditional dependencies between a set of $n$ variables as a directed forest and are motivated by their more efficient inference and improved interpretability. Since the…
We prove that every tree on $n$ edges decomposes $K_{nx,nx}$ and $K_{2nx + 1}$ for all positive integers $x$. The said decompositions are obtained by proving that every tree admits a $\vec{\beta}$-labeling (oriented beta-labeling). Our…
For a $k$-tree $T$, we prove that the maximum local mean order is attained in a $k$-clique of degree $1$ and that it is not more than twice the global mean order. We also bound the global mean order if $T$ has no $k$-cliques of degree $2$…
The number of spanning trees in a graph $G$ is the total number of distinct spanning subgraphs of $G$ that are trees. In this paper we characterize the unique graph with a prescribed vertex (resp. edge) connectivity, minimum degree and…
In this paper, we provide algorithms to rank, unrank, and randomly generate certain degree-restricted classes of Cayley trees. Specifically, we consider classes of trees that have a given degree sequence or a given multiset of degrees. If…
We study multicolour, oriented and high-dimensional discrepancies of the set of all subtrees of a tree. As our main result, we show that the $r$-colour discrepancy of the subtrees of any tree is a linear function of the number of leaves…
A k-ranking of a graph G is a labeling of the vertices of G with values from {1,...,k} such that any path joining two vertices with the same label contains a vertex having a higher label. The tree-depth of G is the smallest value of k for…
The tree inclusion problem is, given two node-labeled trees $P$ and $T$ (the ``pattern tree'' and the ``target tree''), to locate every minimal subtree in $T$ (if any) that can be obtained by applying a sequence of node insertion operations…
Recently, a new vector encoding, Ordered Leaf Attachment (OLA), was introduced that represents $n$-leaf phylogenetic trees as $n-1$ length integer vectors by recording the placement location of each leaf. Both encoding and decoding of trees…
An order-theoretic forest is a countable partial order such that the set of elements larger than any element is linearly ordered. It is an order-theoretic tree if any two elements have an upper-bound. The order type of a branch can be any…
An identifying code $C$ of a graph $G$ is a dominating set of $G$ such that any two distinct vertices of $G$ have distinct closed neighbourhoods within $C$. These codes have been widely studied for over two decades. We give an improvement…
A transversal in a rooted tree is any set of nodes that meets every path from the root to a leaf. We let c(T,k) denote the number of transversals of size k in a rooted tree T. We define a partial order on the set of all rooted trees with n…
We study an abstract notion of tree structure which lies at the common core of various tree-like discrete structures commonly used in combinatorics: trees in graphs, order trees, nested subsets of a set, tree-decompositions of graphs and…
A signed graph $G$ is a graph where each edge is assigned a + (positive edge) or a - (negative edge). The signed degree of a vertex $v$ in a signed graph, denoted by $sdeg(v)$, is the number of positive edges incident to $v$ subtracted by…
The proper thinness of a graph is an invariant that generalizes the concept of a proper interval graph. Every graph has a numerical value of proper thinness and the graphs with proper thinness~1 are exactly the proper interval graphs. A…
We study the number of 231-avoiding permutations with $j$-descents and maximum drop is less than or equal to $k$ which we denote by $a_{n,231,j}^{(k)}$. We show that $a_{n,231,j}^{(k)}$ also counts the number of Dyck paths of length $2n$…
We study the problem of learning a node-labeled tree given independent traces from an appropriately defined deletion channel. This problem, tree trace reconstruction, generalizes string trace reconstruction, which corresponds to the tree…