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The origin of diversification and coexistence of genes and species have been traditionally studied in isolated biological levels. Ecological and evolutionary views have focused on the mechanisms that enable or constrain species coexistence,…

Populations and Evolution · Quantitative Biology 2008-07-18 Carlos J. Melian , David Alonso , Diego P. Vazquez , James Regetz

Darwin's theory of evolution is considered to be one of the greatest scientific gems in modern science. It not only gives us a description of how living things evolve, but also shows how a population evolves through time and also, why only…

Machine Learning · Computer Science 2013-12-18 Arka Bhattacharya

A biologically motivated individual-based framework for evolution in network-structured populations is developed that can accommodate eco-evolutionary dynamics. This framework is used to construct a network birth and death model. The…

Populations and Evolution · Quantitative Biology 2021-03-19 Karan Pattni , Christopher E. Overton , Kieran J. Sharkey

Finding general conditions which ensure that a graph is Hamiltonian is a central topic in graph theory. An old and well known conjecture in the area states that any $d$-regular $n$-vertex graph $G$ whose second largest eigenvalue in…

Combinatorics · Mathematics 2023-03-10 Stefan Glock , David Munhá Correia , Benny Sudakov

Graph invariants provide a powerful analytical tool for investigation of abstract structures of graphs. They, combined in convenient relations, carry global and general information about a graph and its various substructures such as cycle…

Combinatorics · Mathematics 2010-09-15 Zh. G. Nikoghosyan

Evolution in finite populations is often modelled using the classical Moran process. Over the last ten years this methodology has been extended to structured populations using evolutionary graph theory. An important question in any such…

Populations and Evolution · Quantitative Biology 2015-05-25 Karan Pattni , Mark Broom , Jan Rychtar , Lara J. Silvers

We develop the theory of linear evolution equations associated with the adjacency matrix of a graph, focusing in particular on infinite graphs of two kinds: uniformly locally finite graphs as well as locally finite line graphs. We discuss…

Dynamical Systems · Mathematics 2018-07-26 Delio Mugnolo

Evolutionary games on graphs play an important role in the study of evolution of cooperation in applied biology. Using rigorous mathematical concepts from a dynamical systems and graph theoretical point of view, we formalize the notions of…

Dynamical Systems · Mathematics 2014-11-18 Jeremias Epperlein , Stefan Siegmund , Petr Stehlík

Graphs with diverse structural characteristics play a central role in modelling and optimization tasks. The ability to generate different types of graphs that exhibit shared properties is likewise essential for algorithm selection and…

Neural and Evolutionary Computing · Computer Science 2026-03-31 Hendrik Richter , Frank Neumann

Many hard graph problems, such as Hamiltonian Cycle, become FPT when parameterized by treewidth, a parameter that is bounded only on sparse graphs. When parameterized by the more general parameter clique-width, Hamiltonian Cycle becomes…

Data Structures and Algorithms · Computer Science 2014-11-24 Sigve Hortemo Sæther

Population structure can be modelled by evolutionary graphs, which can have a substantial, but very subtle influence on the fate of the arising mutants. Individuals are located on the nodes of these graphs, competing with each other to…

Populations and Evolution · Quantitative Biology 2018-10-31 Marius Möller , Laura Hindersin , Arne Traulsen

Our understanding of the evolutionary process has gone a long way since the publication, 150 years ago, of "On the origin of species" by Charles R. Darwin. The XXth Century witnessed great efforts to embrace replication, mutation, and…

Populations and Evolution · Quantitative Biology 2012-02-02 Susanna C. Manrubia , Jose A. Cuesta

The topological structure of complex networks has fascinated researchers for several decades, resulting in the discovery of many universal properties and reoccurring characteristics of different kinds of networks. However, much less is…

Social and Information Networks · Computer Science 2017-06-28 Yvonne Anne Pignolet , Matthieu Roy , Stefan Schmid , Gilles Tredan

The topological structure of complex networks has fascinated researchers for several decades, resulting in the discovery of many universal properties and reoccurring characteristics of different kinds of networks. However, much less is…

Social and Information Networks · Computer Science 2017-03-02 Yvonne Anne Pignolet , Matthieu Roy , Stefan Schmid , Gilles Tredan

We propose an extremely simple mathematical model that is shown to be able to account for more than 99 per cent of all the variation in economic and demographic macrodynamics of the world for almost two millennia of its history. This…

Statistical Finance · Quantitative Finance 2012-06-05 Andrey Korotayev , Artemy Malkov

Non-uniform hypergraphs appear in various domains of computer science as in the satisfiability problems and in data analysis. We analyse a general model where the probability for an edge of size $t$ to belong to the hypergraph depends of a…

Combinatorics · Mathematics 2015-03-06 Elie de Panafieu

A model of $s$ interacting species is considered with two types of dynamical variables. The fast variables are the populations of the species and slow variables the links of a directed graph that defines the catalytic interactions among…

adap-org · Physics 2009-10-30 Sanjay Jain , Sandeep Krishna

We apply the theory of learning to physically renormalizable systems in an attempt to develop a theory of biological evolution, including the origin of life, as multilevel learning. We formulate seven fundamental principles of evolution…

Populations and Evolution · Quantitative Biology 2022-10-12 Vitaly Vanchurin , Yuri I. Wolf , Mikhail I. Katsnelson , Eugene V. Koonin

We generalise a fundamental graph-theoretical fact, stating that every element of the cycle space of a graph is a sum of edge-disjoint cycles, to arbitrary continua. To achieve this we replace graph cycles by topological circles, and…

General Topology · Mathematics 2011-10-28 Agelos Georgakopoulos

We consider the algorithmic problem of generating each subset of $[n]:=\{1,2,\ldots,n\}$ whose size is in some interval $[k,l]$, $0\leq k\leq l\leq n$, exactly once (cyclically) by repeatedly adding or removing a single element, or by…

Combinatorics · Mathematics 2018-02-16 Petr Gregor , Torsten Mütze
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