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A model for large-scale evolution recently introduced by Amaral and Meyer is studied analytically and numerically. Species are located at different trophic levels and become extinct if their prey becomes extinct. It is proved that this…

adap-org · Physics 2009-10-30 Barbara Drossel

Climate-mediated changes in the spatiotemporal distribution of thermal stress can destabilize animal populations and promote extinction risk. Using quantile, spectral, and wavelet analyses of temperature projections from the latest…

Populations and Evolution · Quantitative Biology 2022-12-22 Kate Duffy , Tarik C. Gouhier , Auroop R. Ganguly

The regularity of ecosystem size spectra is one of the most intriguing and relevant phenomena on our planet. Pelagic size spectra generally show a log-linearly downtrending shape, following a power-law distribution. A constant log-linear…

Populations and Evolution · Quantitative Biology 2026-05-26 Ralf Schwamborn

We describe a simple model of evolution which incorporates the branching and extinction of species lines, and also includes abiotic influences. A first principles approach is taken in which the probability for speciation and extinction are…

adap-org · Physics 2008-02-03 D. A. Head , G. J. Rodgers

The origin and shape of metabolic scaling has been controversial since Kleiber found that basal metabolic rate of animals seemed to vary as a power law of their body mass with exponent 3/4, instead of 2/3, as a surface-to-volume argument…

Very low levels of genetic diversity have been reported in vertebrates with large genomes, notably salamanders and lungfish [1-3]. Interpreting differences in heterozygosity, which reflects genetic diversity in a population, is complicated…

Genomics · Quantitative Biology 2013-09-05 John Herrick , Bianca Sclavi

Due to the conventional distinction between ecological (rapid) and evolutionary (slow)timescales, ecological and population models to date have typically ignored the effects of evolution. Yet the potential for rapid evolutionary change has…

Populations and Evolution · Quantitative Biology 2012-11-20 Laura E. Jones , Stephen P. Ellner

Our paper computationally explores the extinction dynamics of an animal species effected by a sudden spike in mortality due to an extreme event. In our study, the animal species has a 2-year life cycle and is endowed with a high survival…

Quantitative Methods · Quantitative Biology 2007-05-23 Sukanto Bhattacharya , Sreepurna Malakar

The prevailing theory for metabolic scaling is based on area-preserved, space-filling fractal vascular networks. However, it's known both theoretically and experimentally that animals' vascular systems obey Murray's cubic branching law.…

Quantitative Methods · Quantitative Biology 2022-05-31 Jinkui Zhao

We use semi-analytical modelling of galaxy formation to predict the redshift-size-evolution of elliptical galaxies. Using a simple model in which relative sizes of elliptical galaxies of a given mass correlate with the fraction of stars…

Astrophysics · Physics 2011-02-11 Sadegh Khochfar , Joseph Silk

The central goal of a dynamical theory of evolution is to abstract the mean evolutionary trajectory in the trait space by considering ecological processes at the level of the individual. In this work, we develop such a theory for a new…

Populations and Evolution · Quantitative Biology 2020-03-25 Vaibhav Madhok

Shape variability represents an important direct response of organisms to selective environments. Here, we use a combination of geometric morphometrics and generalised additive mixed models (GAMMs) to identify spatial patterns of natural…

Quantitative Methods · Quantitative Biology 2018-02-14 Luca Telesca , Kati Michalek , Trystan Sanders , Lloyd S. Peck , Jakob Thyrring , Elizabeth M. Harper

We present a new model for extinction in which species evolve in bursts or `avalanches', during which they become on average more susceptible to environmental stresses such as harsh climates and so are more easily rendered extinct. Results…

adap-org · Physics 2008-02-03 M. E. J. Newman , B. W. Roberts

Mutations in a microbial population can increase the frequency of a genotype not only by increasing its exponential growth rate, but also by decreasing its lag time or adjusting the yield (resource efficiency). The contribution of multiple…

Populations and Evolution · Quantitative Biology 2018-02-15 Michael Manhart , Bharat V. Adkar , Eugene I. Shakhnovich

Motivated by the finding that there is some biological universality in the relationship between school geometry and school biomass of various pelagic fishes in various conditions, I here establish a scaling law for school dimensions: the…

Populations and Evolution · Quantitative Biology 2007-05-23 Hiro-Sato Niwa

We introduce a new model for large scale evolution and extinction in which species are organized into food chains. The system evolves by two processes: origination/speciation and extinction. In the model, extinction of a given species can…

Statistical Mechanics · Physics 2007-05-23 Luis A. N. Amaral , Martin Meyer

Starting from a master equation, we derive the evolution equation for the size distribution of elements in an evolving system, where each element can grow, divide into two, and produce new elements. We then probe general solutions of the…

Statistical Mechanics · Physics 2011-04-05 Segun Goh , H. W. Kwon , M. Y. Choi , Jean-Yves Fortin

A simple model of biological extinction with variable system size is presented that exhibits a power-law distribution of extinction event sizes. The model is a generalization of a model recently introduced by Newman (Proc. R. Soc. Lond.…

Biological Physics · Physics 2016-09-08 C. Wilke , T. Martinetz

Power law size distribution is found to associate with fractal, self-organized behaviors and patterns of complex systems. Such distribution also emerges from natural lakes, with potentially important links to the dynamics of lake systems.…

Statistical Mechanics · Physics 2023-10-09 Shengjie Hu , Zhenlei Yang , Sergio Torres , Zipeng Wang , Ling Li

The magnitude and variability of Earth's biodiversity have puzzled scientists ever since paleontologic fossil databases became available. We identify and study a model of interdependent species where both endogenous and exogenous impacts…

Populations and Evolution · Quantitative Biology 2014-10-10 Frank Stollmeier , Theo Geisel , Jan Nagler