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Identifying disease-associated changes in DNA methylation can help to gain a better understanding of disease etiology. Bisulfite sequencing technology allows the generation of methylation profiles at single base of DNA. We previously…

Data-driven fault detection has been regarded as a 3D image segmentation task. The models trained from synthetic data are difficult to generalize in some surveys. Recently, training 3D fault segmentation using sparse manual 2D slices is…

Computer Vision and Pattern Recognition · Computer Science 2024-10-28 Yimin Dou , Kewen Li , Jianbing Zhu , Timing Li , Shaoquan Tan , Zongchao Huang

A direct sampling method (DSM) is designed herein for a real-time detection of small anomalies from scattering parameters measured by a small number of dipole antennas. Applicability of the DSM is theoretically demonstrated by proving that…

Numerical Analysis · Mathematics 2019-07-19 Won-Kwang Park , Kwang-Jae Lee , Seong-Ho Son

The use of synthetic (or simulated) data for training machine learning models has grown rapidly in recent years. Synthetic data can often be generated much faster and more cheaply than its real-world counterpart. One challenge of using…

Computer Vision and Pattern Recognition · Computer Science 2022-10-28 Handi Yu , Simiao Ren , Leslie M. Collins , Jordan M. Malof

Existing convolutional neural networks (CNN) based image super-resolution (SR) methods have achieved impressive performance on bicubic kernel, which is not valid to handle unknown degradations in real-world applications. Recent blind SR…

Computer Vision and Pattern Recognition · Computer Science 2022-12-06 Feng Li , Yixuan Wu , Huihui Bai , Weisi Lin , Runmin Cong , Yao Zhao

The Synthetic Aperture Microwave Imaging (SAMI) diagnostic has conducted proof-of-principle 2D Doppler backscattering (DBS) experiments on MAST. SAMI actively probes the plasma edge using a wide (+-40 degrees vertical and horizontal) and…

Plasma Physics · Physics 2015-07-24 D. A. Thomas , K. J. Brunner , S. J. Freethy , B. K. Huang , V. F. Shevchenko , R. G. L. Vann

We introduce a novel shape-sensing method using Resistive Flex Sensors (RFS) embedded in cable-driven Continuum Dexterous Manipulators (CDMs). The RFS is predominantly sensitive to deformation rather than direct forces, making it a…

Robotics · Computer Science 2023-12-06 Chenhan Zhang , Shaopeng Jiang , Heyun Wang , Joshua Liu , Amit Jain , Mehran Armand

Clustered effects are often encountered in multiple hypothesis testing of spatial signals. In this paper, we propose a new method, termed \textit{two-dimensional spatial multiple testing} (2d-SMT) procedure, to control the false discovery…

Methodology · Statistics 2024-08-13 Linsui Deng , Kejun He , Xianyang Zhang

DNA methylation (DNAme) is a critical component of the epigenetic regulatory machinery and aberrations in DNAme patterns occur in many diseases, such as cancer. Mapping and understanding DNAme profiles offers considerable promise for…

In this paper, we present the Directly Denoising Diffusion Model (DDDM): a simple and generic approach for generating realistic images with few-step sampling, while multistep sampling is still preserved for better performance. DDDMs require…

Computer Vision and Pattern Recognition · Computer Science 2024-06-03 Dan Zhang , Jingjing Wang , Feng Luo

Accurate RNA secondary structure prediction is vital for understanding cellular regulation and disease mechanisms. Deep learning (DL) methods have surpassed traditional algorithms by predicting complex features like pseudoknots and…

Biomolecules · Quantitative Biology 2024-01-12 Frederic Runge , Jörg K. H. Franke , Daniel Fertmann , Frank Hutter

Kinship verification aims to find out whether there is a kin relation for a given pair of facial images. Kinship verification databases are born with unbalanced data. For a database with N positive kinship pairs, we naturally obtain N(N-1)…

Computer Vision and Pattern Recognition · Computer Science 2021-03-30 Wanhua Li , Shiwei Wang , Jiwen Lu , Jianjiang Feng , Jie Zhou

Magnetic resonance imaging (MRI) is a vital diagnostic tool, but its inherently long acquisition times reduce clinical efficiency and patient comfort. Recent advancements in deep learning, particularly diffusion models, have improved…

Image and Video Processing · Electrical Eng. & Systems 2026-04-28 Yuxuan Zhang , Jinkui Hao , Bo Zhou

Unlike covalent two-dimensional (2D) materials like graphene, 2D metals have non-layered structures due to their non-directional, metallic bonding. While experiments on 2D metals are still scarce and challenging, density-functional theory…

Materials Science · Physics 2023-01-06 Kameyab Raza Abidi , Pekka Koskinen

A novel fusion python application of data mining techniques (DMT) was designed and implemented to locate, identify, and delineate the subsurface structural pattern (SSP) of source rocks for the features of interest underlain the study area.…

Signal Processing · Electrical Eng. & Systems 2020-06-15 John Stephen Kayode , Yusri Yusup

We have investigated the electronic structure of the dilute magnetic semiconductor (DMS) $Ga_{0.98}Mn_{0.02}P$ and compared it to that of an undoped $GaP$ reference sample, using hard X-ray photoelectron spectroscopy (HXPS) and hard X-ray…

Non-coding RNA structure and function are essential to understanding various biological processes, such as cell signaling, gene expression, and post-transcriptional regulations. These are all among the core problems in the RNA field. With…

Quantitative Methods · Quantitative Biology 2022-08-09 Jiayang Chen , Zhihang Hu , Siqi Sun , Qingxiong Tan , Yixuan Wang , Qinze Yu , Licheng Zong , Liang Hong , Jin Xiao , Tao Shen , Irwin King , Yu Li

The direct sampling method (DSM) has been introduced for non-iterative imaging of small inhomogeneities and is known to be fast, robust, and effective for inverse scattering problems. However, to the best of our knowledge, a full analysis…

Numerical Analysis · Mathematics 2018-09-26 Sangwoo Kang , Marc Lambert , Won-Kwang Park

Untargeted metabolomics using LC-MS/MS offers the potential to comprehensively profile the chemical diversity of biological samples. However, the process is fundamentally limited by the "identification bottleneck," where only a small…

Quantitative Methods · Quantitative Biology 2025-10-14 Hansol Hong , Sangwon Lee , Jang-Ho Ha , Sung-June Chu , So-Hee An , Woo-Hyun Paek , Gyuhwa Chung , Kyoung Tai No

Magnetic resonance spectroscopy (MRS) is an important technique in biomedical research and it has the unique capability to give a non-invasive access to the biochemical content (metabolites) of scanned organs. In the literature, the…

Computer Vision and Pattern Recognition · Computer Science 2018-06-20 Nima Hatami , Michaël Sdika , Hélène Ratiney