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Phylogenetic varieties related to equivariant substitution models have been studied largely in the last years. One of the main objectives has been finding a set of generators of the ideal of these varieties, but this has not yet been…

Algebraic Geometry · Mathematics 2015-12-23 M. Casanellas , J. Fernández-Sánchez , M. Michałek

Many of the stochastic models used in inference of phylogenetic trees from biological sequence data have polynomial parameterization maps. The image of such a map --- the collection of joint distributions for a model --- forms the model…

Populations and Evolution · Quantitative Biology 2012-12-07 Elizabeth S. Allman , John A. Rhodes , Amelia Taylor

In the last decade, some algebraic tools have been successfully applied to phylogenetic reconstruction. These tools are mainly based on the knowledge of equations describing algebraic varieties associated to phylogenetic trees evolving…

Populations and Evolution · Quantitative Biology 2025-07-04 Marta Casanellas , Jesús Fernández-Sánchez

We study group extensions of Finite Abelian Groups using matrices. We also prove a Theorem for equivalence of extensions using matrices.

Group Theory · Mathematics 2018-02-16 Guhan Venkat

We show that the epimorphism problem is solvable for targets that are virtually cyclic or a product of an Abelian group and a finite group.

Group Theory · Mathematics 2021-03-24 Stefan Friedl , Clara Loeh

Consider the algebraic dynamics on a torus T=G_m^n given by a matrix M in GL_n(Z). Assume that the characteristic polynomial of M is prime to all polynomials X^m-1. We show that any finite equivariant map from another algebraic dynamics…

Logic · Mathematics 2016-02-24 Zoé Chatzidakis , Ehud Hrushovski

It is known how to compute the Zariski closure of a finitely generated monoid of matrices and, more generally, of a set of matrices specified by a regular language. This result was recently used to give a procedure to compute all polynomial…

Formal Languages and Automata Theory · Computer Science 2025-10-28 Rida Ait El Manssour , Mahsa Naraghi , Mahsa Shirmohammadi , James Worrell

We prove a topological reconstruction result for the category of cellular $A$-equivariant motivic spectra over the complex numbers where $A$ is a finite abelian group: after completion at an arbitrary prime, this is equivalent to the…

Algebraic Topology · Mathematics 2025-10-24 Keita Allen , Lucas Piessevaux

We study lattices in free abelian groups of infinite rank that are invariant under the action of the infinite symmetric group, with emphasis on finiteness of their equivariant bases. Our framework provides a new method for proving…

Combinatorics · Mathematics 2023-09-15 Dinh Van Le , Tim Römer

In 2012, Zilber used model-theoretic techniques to show that a curve of high genus over an algebraically closed field is determined by its Jacobian (viewed only as an abstract group with a distinguished subset for an image of the curve). In…

Logic · Mathematics 2025-04-08 Benjamin Castle , Assaf Hasson

We study $\textrm{Sym}(\infty)$-orbit closures of not necessarily closed points in the Zariski spectrum of the infinite polynomial ring $\mathbb{C}[x_{ij}:\, i\in\mathbb{N},\,j\in[n]]$. Among others, we characterize invariant prime ideals…

Algebraic Geometry · Mathematics 2026-01-30 Mario Kummer , Cordian Riener

We study the groups of rational points of abelian varieties defined over a finite field $ \mathbb{F}_q$ whose endomorphism rings are commutative, or, equivalently, whose isogeny classes are determined by squarefree characteristic…

Number Theory · Mathematics 2025-02-26 Stefano Marseglia , Caleb Springer

Motivated by phylogenetics, our aim is to obtain a system of equations that define a phylogenetic variety on an open set containing the biologically meaningful points. In this paper we consider phylogenetic varieties defined via group-based…

Algebraic Geometry · Mathematics 2014-02-28 Marta Casanellas , Jesús Fernández-Sánchez , Mateusz Michałek

The cohomology of coherent sheaves and sheaves of Abelian groups on Noetherian schemes are interpreted in second order arithmetic by means of a finiteness theorem. This finiteness theorem provably fails for the etale topology even on…

Logic · Mathematics 2012-07-26 Colin McLarty

We investigate the complexity of computing the Zariski closure of a finitely generated group of matrices. The Zariski closure was previously shown to be computable by Derksen, Jeandel, and Koiran, but the termination argument for their…

Computational Complexity · Computer Science 2025-03-05 Klara Nosan , Amaury Pouly , Sylvain Schmitz , Mahsa Shirmohammadi , James Worrell

Let $K$ be a number field. We present several new finiteness results for isomorphism classes of abelian varieties over $K$ whose $\ell$-power torsion fields are arithmetically constrained for some rational prime $\ell$. Such arithmetic…

Number Theory · Mathematics 2013-02-07 Christopher Rasmussen , Akio Tamagawa

We study two families of $g$-dimensional abelian varieties, induced by distinct rational maps defined on a common variety $\overline{\mathcal A}$ and mapping to two bases $\overline{S}_1$ and $\overline{S}_2$. Two non-torsion sections…

Number Theory · Mathematics 2025-03-25 Ekaterina Amerik , Paolo Dolce , Francesco Tropeano

We exhibit an algorithm to compute the strongest polynomial (or algebraic) invariants that hold at each location of a given affine program (i.e., a program having only non-deterministic (as opposed to conditional) branching and all of whose…

Logic in Computer Science · Computer Science 2018-05-03 Ehud Hrushovski , Joël Ouaknine , Amaury Pouly , James Worrell

Tkachenko and Yaschenko [34] characterized the abelian groups G such that all proper unconditionally closed subsets of G are finite, these are precisely the abelian groups G having cofinite Zariski topology (they proved that such a G is…

Group Theory · Mathematics 2021-10-26 Marco Bonatto , Dikran Dikranjan , Daniele Toller

In this paper we will prove that Tate conjecture of abelian varieties over finite field is equivalent to the finiteness of isomorphism classes of abelian varieties with a fixed dimension. We give a different approach with Zarhin's result.

Algebraic Geometry · Mathematics 2019-01-08 Anningzhe Gao
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