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In phylogenetic networks, it is desirable to estimate edge lengths in substitutions per site or calendar time. Yet, there is a lack of scalable methods that provide such estimates. Here we consider the problem of obtaining edge length…

Populations and Evolution · Quantitative Biology 2024-08-06 Jingcheng Xu , Cécile Ané

A geometric graph $G$ is $xy-$monotone if each pair of vertices of $G$ is connected by a $xy-$monotone path. We study the problem of producing the $xy-$monotone spanning geometric graph of a point set $P$ that (i) has the minimum cost,…

Computational Geometry · Computer Science 2018-09-27 Konstantinos Mastakas

Let $G$ be a connected graph with vertex set $V(G)$, and denote by $d_G(u,v)$ the distance from $u$ to $v$ in $G$, for any $u,v \in V(G)$. The average distance of an $n$-vertex connected graph $G$, denoted by $\mu(G)$, is defined to be the…

Combinatorics · Mathematics 2026-05-07 Zhibin Du , Xuli Qi

Given a 2-edge connected, unweighted, and undirected graph $G$ with $n$ vertices and $m$ edges, a $\sigma$-tree spanner is a spanning tree $T$ of $G$ in which the ratio between the distance in $T$ of any pair of vertices and the…

Data Structures and Algorithms · Computer Science 2018-10-03 Davide Bilò , Kleitos Papadopoulos

The tree spanner problem for a graph $G$ is as follows: For a given integer $k$, is there a spanning tree $T$ of $G$ (called a tree $k$-spanner) such that the distance in $T$ between every pair of vertices is at most $k$ times their…

Combinatorics · Mathematics 2025-02-07 Lan Lin , Yixun Lin

In this note we prove that minimal networks enjoy minimizing properties for the length functional. A minimal network is, roughly speaking, a subset of $\mathbb{R}^2$ composed of straight segments joining at triple junctions forming angles…

Optimization and Control · Mathematics 2023-08-30 Alessandra Pluda , Marco Pozzetta

Let $G$ be a directed planar graph of complexity $n$, each arc having a nonnegative length. Let $s$ and $t$ be two distinct faces of $G$; let $s_1,...,s_k$ be vertices incident with $s$; let $t_1,...,t_k$ be vertices incident with $t$. We…

Data Structures and Algorithms · Computer Science 2008-02-21 Eric Colin De Verdière , Alexander Schrijver

A vertex $v\in V$ is said to resolve two vertices $x$ and $y$ if $d_G(v,x)\ne d_G(v,y)$. A set $S\subset V$ is said to be a metric generator for $G$ if any pair of vertices of $G$ is resolved by some element of $S$. A minimum metric…

Combinatorics · Mathematics 2017-04-25 Y. Ramirez-Cruz , O. R. Oellermann , J. A. Rodriguez-Velazquez

A tree $t$-spanner $T$ of a graph $G$ is a spanning tree of $G$ such that the distance in $T$ between every pair of verices is at most $t$ times the distance in $G$ between them. There are efficient algorithms that find a tree $t\cdot…

Computational Complexity · Computer Science 2016-04-19 Ioannis Papoutsakis

Given an undirected unweighted graph $G$ and a source set $S$ of $|S| = \sigma $ sources, we want to build a data structure which can process the following query {\sc Q}$(s,t,e):$ find the shortest distance from $s$ to $t$ avoiding an edge…

Data Structures and Algorithms · Computer Science 2018-05-02 Manoj Gupta , Aditi Singh

We consider Directed Steiner Forest (DSF), a fundamental problem in network design. The input to DSF is a directed edge-weighted graph $G = (V, E)$ and a collection of vertex pairs $\{(s_i, t_i)\}_{i \in [k]}$. The goal is to find a minimum…

Data Structures and Algorithms · Computer Science 2024-10-24 Chandra Chekuri , Rhea Jain

Tree-decompositions and treewidth are of fundamental importance in structural and algorithmic graph theory. The "spread" of a tree-decomposition is the minimum integer $s$ such that every vertex lies in at most $s$ bags. A…

Combinatorics · Mathematics 2026-04-08 Marc Distel , Neel Kaul , Raj Kaul , David R. Wood

Let $G$ be a graph with degree sequence $d_1\geq \ldots \geq d_n$. Slater proposed $s\ell(G)=\min\{ s: (d_1+1)+\cdots+(d_s+1)\geq n\}$ as a lower bound on the domination number $\gamma(G)$ of $G$. We show that deciding the equality of…

Combinatorics · Mathematics 2016-08-17 Michael Gentner , Dieter Rautenbach

In this article, we explicitly derive the limiting degree distribution of the shortest path tree from a single source on various random network models with edge weights. We determine the asymptotics of the degree distribution for large…

Probability · Mathematics 2016-08-11 Shankar Bhamidi , Jesse Goodman , Remco van der Hofstad , Júlia Komjáthy

Assignment of one of the two possible directions to every edge of an undirected graph $G=(V,E)$ is called an orientation of $G$. The resulting directed graph is denoted by $\overrightarrow{G}$. A strong orientation is one in which every…

Discrete Mathematics · Computer Science 2022-03-29 K. S. Ajish Kumar , Birenjith Sasidharan , K. S. Sudeep

By "geodesic" we mean any sequence of vertices $(v_1,v_2,...,v_k)$ of a graph $G$ that constitute a shortest path from $v_1$ to $v_k$. We propose a novel, natural algorithm to enumerate all geodesics of $G$, and pit it (using Mathematica)…

Combinatorics · Mathematics 2025-09-30 Marcel Wild

A subset S of vertices of a graph G is called a k-path vertex cover if every path of order k in G contains at least one vertex from S. Denote by \psi_k(G) the minimum cardinality of a k-path vertex cover in G. It is shown that the problem…

Combinatorics · Mathematics 2011-08-02 Boštjan Brešar , František Kardoš , Ján Katrenič , Gabriel Semanišin

Given two sets of points in the plane, $P$ of $n$ terminals and $S$ of $m$ Steiner points, a Steiner tree of $P$ is a tree spanning all points of $P$ and some (or none or all) points of $S$. A Steiner tree with length of longest edge…

Computational Geometry · Computer Science 2010-12-08 A. Karim Abu-Affash

This paper introduces an exact algorithm for the construction of a shortest curvature-constrained network interconnecting a given set of directed points in the plane and an iterative method for doing so in 3D space. Such a network will be…

In the Single Source Replacement Paths (SSRP) problem we are given a graph $G = (V, E)$, and a shortest paths tree $\widehat{K}$ rooted at a node $s$, and the goal is to output for every node $t \in V$ and for every edge $e$ in…

Data Structures and Algorithms · Computer Science 2020-04-29 Shiri Chechik , Ofer Magen
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