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The maximum common subtree isomorphism problem asks for the largest possible isomorphism between subtrees of two given input trees. This problem is a natural restriction of the maximum common subgraph problem, which is ${\sf NP}$-hard in…

Data Structures and Algorithms · Computer Science 2016-08-23 Andre Droschinsky , Nils M. Kriege , Petra Mutzel

Given a graphical model, one essential problem is MAP inference, that is, finding the most likely configuration of states according to the model. Although this problem is NP-hard, large instances can be solved in practice. A major open…

Machine Learning · Statistics 2017-03-09 Erik M. Lindgren , Alexandros G. Dimakis , Adam Klivans

Many complex questions in biology, physics, and mathematics can be mapped to the graph isomorphism problem and the closely related graph automorphism problem. In particular, these problems appear in the context of network visualization,…

Data Structures and Algorithms · Computer Science 2012-11-14 Charo I. Del Genio , Thilo Gross

Probabilistic circuits (PCs) such as sum-product networks efficiently represent large multi-variate probability distributions. They are preferred in practice over other probabilistic representations such as Bayesian and Markov networks…

Machine Learning · Computer Science 2024-02-07 Shivvrat Arya , Tahrima Rahman , Vibhav Gogate

We initiate the study of a fundamental combinatorial problem: Given a capacitated graph $G=(V,E)$, find a shortest walk ("route") from a source $s\in V$ to a destination $t\in V$ that includes all vertices specified by a set…

Data Structures and Algorithms · Computer Science 2018-05-01 Saeed Akhoondian Amiri , Klaus-Tycho Foerster , Stefan Schmid

In the matching interdiction problem, we are given an undirected graph with weights and interdiction costs on the edges and seek to remove a subset of the edges constrained to some budget, such that the weight of a maximum weight matching…

Discrete Mathematics · Computer Science 2008-04-23 Rico Zenklusen

The arc-routing problems are known to be notoriously hard. We study here a natural arc-routing problem on trees and more generally on bounded tree-width graphs and surprisingly show that it can be solved in a polynomial time. This implies a…

Data Structures and Algorithms · Computer Science 2020-11-17 Jiří Fink , Martin Loebl

We present linear time {\it in-place} algorithms for several basic and fundamental graph problems including the well-known graph search methods (like depth-first search, breadth-first search, maximum cardinality search), connectivity…

Data Structures and Algorithms · Computer Science 2019-07-24 Sankardeep Chakraborty , Kunihiko Sadakane , Srinivasa Rao Satti

We propose an algorithmic framework for efficient anytime motion planning on large dense geometric roadmaps, in domains where collision checks and therefore edge evaluations are computationally expensive. A large dense roadmap (graph) can…

The min-rank of a graph was introduced by Haemers (1978) to bound the Shannon capacity of a graph. This parameter of a graph has recently gained much more attention from the research community after the work of Bar-Yossef et al. (2006). In…

Combinatorics · Mathematics 2016-11-26 Son Hoang Dau , Yeow Meng Chee

In this paper, we study the problem of map matching with travel time constraints. Given a sequence of $k$ spatio-temporal measurements and an embedded path graph with travel time costs, the goal is to snap each measurement to a close-by…

Computational Geometry · Computer Science 2025-06-24 Yannick Bosch , Sabine Storandt

We consider the structured-output prediction problem through probabilistic approaches and generalize the "perturb-and-MAP" framework to more challenging weighted Hamming losses, which are crucial in applications. While in principle our…

Machine Learning · Statistics 2018-11-22 Tatiana Shpakova , Francis Bach , Anton Osokin

We consider optimal route planning when the objective function is a general nonlinear and non-monotonic function. Such an objective models user behavior more accurately, for example, when a user is risk-averse, or the utility function needs…

Data Structures and Algorithms · Computer Science 2015-11-24 Ger Yang , Evdokia Nikolova

The linear induced matching width (LMIM-width) of a graph is a width parameter defined by using the notion of branch-decompositions of a set function on ternary trees. In this paper we study output-polynomial enumeration algorithms on…

Data Structures and Algorithms · Computer Science 2015-09-16 Petr A. Golovach , Pinar Heggernes , Mamadou Moustapha Kanté , Dieter Kratsch , Sigve H. Sæther , Yngve Villanger

We give polynomial-time algorithms for the exact computation of lowest-energy (ground) states, worst margin violators, log partition functions, and marginal edge probabilities in certain binary undirected graphical models. Our approach…

Machine Learning · Computer Science 2009-09-29 Nicol N. Schraudolph , Dmitry Kamenetsky

Many combinatorial optimization problems can be formulated as the search for a subgraph that satisfies certain properties and minimizes the total weight. We assume here that the vertices correspond to points in a metric space and can take…

Data Structures and Algorithms · Computer Science 2024-12-25 Marin Bougeret , Jérémy Omer , Michael Poss

In this paper, we provide polynomial-time algorithms for different extensions of the matching counting problem, namely maximal matchings, path matchings (linear forest) and paths, on graph classes of bounded clique-width. For maximal…

Discrete Mathematics · Computer Science 2018-06-05 Benjamin Hellouin de Menibus , Takeaki Uno

We consider combinatorial problems that can be solved in polynomial time for graphs of bounded treewidth but where the order of the polynomial that bounds the running time is expected to depend on the treewidth bound. First we review some…

Data Structures and Algorithms · Computer Science 2015-03-19 Stefan Szeider

We prove a characterization of all polynomial-time computable queries on the class of interval graphs by sentences of fixed-point logic with counting. More precisely, it is shown that on the class of unordered interval graphs, any query is…

Logic in Computer Science · Computer Science 2011-01-14 Bastian Laubner

The irrelevant vertex technique provides a powerful tool for the design of parameterized algorithms for a wide variety of problems on graphs. A common characteristic of these problems, permitting the application of this technique on…

Data Structures and Algorithms · Computer Science 2026-05-01 Petr A. Golovach , Stavros G. Kolliopoulos , Giannos Stamoulis , Dimitrios M. Thilikos