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Biomedical named entity recognition (NER) is a high-utility natural language processing (NLP) task, and large language models (LLMs) show promise particularly in few-shot settings (i.e., limited training data). In this article, we address…

Computation and Language · Computer Science 2025-08-12 Yao Ge , Sudeshna Das , Yuting Guo , Abeed Sarker

Retrieval-Augmented Generation (RAG) struggles with domain-specific enterprise datasets, often isolated behind firewalls and rich in complex, specialized terminology unseen by LLMs during pre-training. Semantic variability across domains…

Computation and Language · Computer Science 2025-08-06 Kunal Sawarkar , Shivam R. Solanki , Abhilasha Mangal

Training LLMs for code-related tasks typically depends on high-quality code-documentation pairs, which are costly to curate and often scarce for niche programming languages. We introduce BatCoder, a self-supervised reinforcement learning…

When models, e.g., for semantic segmentation, are applied to images that are vastly different from training data, the performance will drop significantly. Domain adaptation methods try to overcome this issue, but need samples from the…

Computer Vision and Pattern Recognition · Computer Science 2023-12-05 Joshua Niemeijer , Manuel Schwonberg , Jan-Aike Termöhlen , Nico M. Schmidt , Tim Fingscheidt

Biomedical named entity recognition is one of the core tasks in biomedical natural language processing (BioNLP). To tackle this task, numerous supervised/distantly supervised approaches have been proposed. Despite their remarkable success,…

Computation and Language · Computer Science 2023-10-16 Zihao Fu , Yixuan Su , Zaiqiao Meng , Nigel Collier

Now a day's, search engines are been most widely used for extracting information's from various resources throughout the world. Where, majority of searches lies in the field of biomedical for retrieving related documents from various…

Information Retrieval · Computer Science 2009-12-14 Jayanthi Manicassamy , P. Dhavachelvan

Analyzing the increasingly large volumes of data that are available today, possibly including the application of custom machine learning models, requires the utilization of distributed frameworks. This can result in serious productivity…

Databases · Computer Science 2019-08-20 Phanwadee Sinthong , Michael J. Carey

Most state-of-the-art open-domain question answering systems use a neural retrieval model to encode passages into continuous vectors and extract them from a knowledge source. However, such retrieval models often require large memory to run…

Computation and Language · Computer Science 2021-06-03 Ikuya Yamada , Akari Asai , Hannaneh Hajishirzi

Extracting insights from Electronic Health Record (EHR) databases often requires SQL expertise, creating a barrier for clinical decision-making and research. A promising approach is to use Large Language Models (LLMs) to translate natural…

Information Retrieval · Computer Science 2026-04-21 Hung Nguyen , Hans Moen , Pekka Marttinen

Diffusion and flow-based non-autoregressive (NAR) models have shown strong promise in large language modeling, however, their potential for automatic speech recognition (ASR) remains largely unexplored. We propose Drax, a discrete flow…

Audio and Speech Processing · Electrical Eng. & Systems 2025-10-07 Aviv Navon , Aviv Shamsian , Neta Glazer , Yael Segal-Feldman , Gill Hetz , Joseph Keshet , Ethan Fetaya

Although abbreviations are fairly common in handwritten sources, particularly in medieval and modern Western manuscripts, previous research dealing with computational approaches to their expansion is scarce. Yet abbreviations present…

Computation and Language · Computer Science 2021-07-09 Jean-Baptiste Camps , Chahan Vidal-Gorène , Marguerite Vernet

In this work, a new indexing technique of data streams called BSTree is proposed. This technique uses the method of data discretization, SAX [4], to reduce online the dimensionality of data streams. It draws on Btree to build the index and…

Databases · Computer Science 2014-06-24 Abdelwaheb Ferchichi , Mohamed Salah Gouider

Summarizing patient clinical notes is vital for reducing documentation burdens. Current manual summarization makes medical staff struggle. We propose an automatic method using LLMs, but long inputs cause LLMs to lose context, reducing…

Artificial Intelligence · Computer Science 2024-11-15 Guoqing Zhang , Keita Fukuyama , Kazumasa Kishimoto , Tomohiro Kuroda

Although information extraction and coreference resolution appear together in many applications, most current systems perform them as ndependent steps. This paper describes an approach to integrated inference for extraction and coreference…

Machine Learning · Computer Science 2012-07-19 Ben Wellner , Andrew McCallum , Fuchun Peng , Michael Hay

Medical image segmentation models are typically optimised with voxel-wise losses that constrain predictions only in the output space. This leaves latent feature representations largely unconstrained, potentially limiting generalisation. We…

Image and Video Processing · Electrical Eng. & Systems 2026-03-02 Puru Vaish , Amin Ranem , Felix Meister , Tobias Heimann , Christoph Brune , Jelmer M. Wolterink

We present a tool and theory RE# for regular expression matching that is built on symbolic derivatives, does not use backtracking, and, in addition to the classical operators, also supports complement, intersection and lookarounds. We…

Formal Languages and Automata Theory · Computer Science 2025-01-27 Ian Erik Varatalu , Margus Veanes , Juhan-Peep Ernits

Regular expressions are pervasive in modern systems. Many real-world regular expressions are inefficient, sometimes to the extent that they are vulnerable to complexity-based attacks, and while much research has focused on detecting…

Programming Languages · Computer Science 2022-09-30 Jedidiah McClurg , Miles Claver , Jackson Garner , Jake Vossen , Jordan Schmerge , Mehmet E. Belviranli

Following natural language instructions by executing actions in digital environments (e.g. web-browsers and REST APIs) is a challenging task for language model (LM) agents. Unfortunately, LM agents often fail to generalize to new…

Computation and Language · Computer Science 2024-06-11 Shikhar Murty , Christopher Manning , Peter Shaw , Mandar Joshi , Kenton Lee

In the rapidly evolving field of healthcare and beyond, the integration of generative AI in Electronic Health Records (EHRs) represents a pivotal advancement, addressing a critical gap in current information extraction techniques. This…

Computation and Language · Computer Science 2024-06-03 Mohammed-Khalil Ghali , Abdelrahman Farrag , Hajar Sakai , Hicham El Baz , Yu Jin , Sarah Lam

Approximate Bayesian computation (ABC) has gained popularity in recent years owing to its easy implementation, nice interpretation and good performance. Its advantages are more visible when one encounters complex models where maximum…

Computation · Statistics 2016-08-19 Xiaolong Zhong , Malay Ghosh