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Understanding how internal community structure shapes the course of epidemics remains a fundamental challenge in modeling real-world populations. Standard metapopulation models often assume uniform mixing within communities, overlooking how…

Physics and Society · Physics 2025-11-07 Haoyang Qian , Malbor Asllani

Network--based epidemic models that account for heterogeneous contact patterns are extensively used to predict and control the diffusion of infectious diseases. We use census and survey data to reconstruct a geo--referenced and…

Social and Information Networks · Computer Science 2026-05-19 Alessandro Celestini , Francesca Colaiori , Stefano Guarino , Enrico Mastrostefano , Lena Rebecca Zastrow

Accurate prediction of contagious disease outbreaks is vital for informed decision-making. Our study addresses the gap between machine learning algorithms and their epidemiological applications, noting that methods optimal for benchmark…

Machine Learning · Computer Science 2025-06-16 Suhan Guo , Zhenghao Xu , Furao Shen , Jian Zhao

Metapopulation epidemic models describe epidemic dynamics in networks of spatially distant patches connected with pathways for migration of individuals. In the present study, we deal with a susceptible-infected-recovered (SIR)…

Physics and Society · Physics 2019-08-22 Akari Matsuki , Gouhei Tanaka

It is often useful to represent the infectious dynamics of mobile agents by metapopulation models. In such a model, metapopulations form a static network, and individuals migrate from one metapopulation to another. It is known that…

Disordered Systems and Neural Networks · Physics 2010-09-09 Naoki Masuda

Identifying influential subpopulations in metapopulation epidemic models has far-reaching potential implications for surveillance and intervention policies of a global pandemic. However, there is a lack of methods to determine influential…

Physics and Society · Physics 2022-04-15 Jeehye Choi , Byungjoon Min

Chikungunya is an emerging threat for health security all over the world which is spreading very fast. Researches for proper forecasting of the incidence rate of chikungunya has been going on in many places in which DARPA has done a very…

Machine Learning · Computer Science 2021-01-12 Sayed Erfan Arefin , Tasnia Ashrafi Heya , Dr Moinul Zaber

Passenger contact in public transit (PT) networks can be a key mediate in the spreading of infectious diseases. This paper proposes a time-varying weighted PT encounter network to model the spreading of infectious diseases through the PT…

Physics and Society · Physics 2020-11-24 Baichuan Mo , Kairui Feng , Yu Shen , Clarence Tam , Daqing Li , Yafeng Yin , Jinhua Zhao

Epidemic modelling on complex networks has been studied intensively all the time. The majority of relative research assumes that the time scale of the underlying network evolution is much larger compared to the propagation dynamics on it,…

Physics and Society · Physics 2026-04-14 Minyu Feng , Yuhan Li , Jürgen Kurths

Epidemiological simulations as a method are used to better understand and predict the spreading of infectious diseases, for example of COVID-19. This paper presents an approach that combines person-centric data-driven human mobility…

Vector-transmitted diseases such as dengue fever and chikungunya have been spreading rapidly in many parts of the world. The Zika virus has been known since 1947 and invaded South America in 2013. It can be transmitted not only by…

Populations and Evolution · Quantitative Biology 2016-08-23 Fred Brauer , Carlos Castillo-Chavez , Anuj Mubayi , Sherry Towers

The dynamics of infectious diseases propagating in populations depends both on human interaction patterns, the contagion process and the pathogenesis within hosts. The immune system follows a circadian rhythm and, consequently, the chance…

Populations and Evolution · Quantitative Biology 2020-07-01 Zhanwei Du , Petter Holme

Epidemic spreading phenomena are ubiquitous in nature and society. Examples include the spreading of diseases, information, and computer viruses. Epidemics can spread by local spreading, where infected nodes can only infect a limited set of…

Physics and Society · Physics 2024-01-02 Changwang Zhang , Shi Zhou , Joel C. Miller , Ingemar J. Cox , Benjamin M. Chain

Arboviruses represent a significant threat to human, animal, and plant health worldwide. To elucidate transmission, anticipate their spread and efficiently control them, mechanistic modelling has proven its usefulness. However, most models…

Populations and Evolution · Quantitative Biology 2024-08-06 Léa Loisel , Vincent Raquin , Maxime Ratinier , Pauline Ezanno , Gaël Beaunée

Emerging infectious diseases and climate change are two of the major challenges in 21st century. Although over the past decades, highly-resolved mathematical models have contributed in understanding dynamics of infectious diseases and are…

Populations and Evolution · Quantitative Biology 2025-10-13 Julia Bicker , René Schmieding , Michael Meyer-Hermann , Martin J. Kühn

We propose an epidemic model for the spread of vector-borne diseases. The model, which is built extending the classical susceptible-infected-susceptible model, accounts for two populations -- humans and vectors -- and for cross-contagion…

Systems and Control · Electrical Eng. & Systems 2025-10-21 Lorenzo Zino , Alessandro Casu , Alessandro Rizzo

Chikungunya virus is a mosquito-borne arbovirus with the potential to establish sustained transmission in subtropical regions like Florida, where climatic and ecological conditions support vector proliferation. In this study, we develop a…

Populations and Evolution · Quantitative Biology 2025-10-20 Antonio Gondim , Leonardo Schultz , Xi Huo , Shigui Ruan

In this paper we present a model to estimate the density of aedes mosquitoes in a community affected by dengue. The model is based on the fitting of a continuous function to the incidence of dengue infections, from which the density of…

Graph convolutional neural networks (GCNs) have shown tremendous promise in addressing data-intensive challenges in recent years. In particular, some attempts have been made to improve predictions of Susceptible-Infected-Recovered (SIR)…

Machine Learning · Statistics 2025-01-07 Petr Kisselev , Padmanabhan Seshaiyer

We present two new models for interacting populations subject to a transmissible disease. The novelty lies in the assumption that herd behavior influences the disease incidence, rather than the demographic description of the interactions,…

Dynamical Systems · Mathematics 2014-05-19 Ezio Venturino