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Businesses, governmental bodies and NGO's have an ever-increasing amount of data at their disposal from which they try to extract valuable information. Often, this needs to be done not only accurately but also within a short time frame.…

Machine Learning · Computer Science 2021-09-16 Pim Verschuuren , Serena Palazzo , Tom Powell , Steve Sutton , Alfred Pilgrim , Michele Faucci Giannelli

In this work, we address fusion of heterogeneous sensor data using wavelet-based summaries of fused self-similarity information from each sensor. The technique we develop is quite general, does not require domain specific knowledge or…

Computer Vision and Pattern Recognition · Computer Science 2019-01-08 Christopher J. Tralie , Paul Bendich , John Harer

We introduce Flux Matching, a new paradigm for generative modeling that generalizes existing score-based models to a broader family of vector fields that need not be conservative. Rather than requiring the model to equal the data score, the…

Machine Learning · Computer Science 2026-05-11 Peter Pao-Huang , Xiaojie Qiu , Stefano Ermon

The Genomic Foundation Model (GFM) paradigm is expected to facilitate the extraction of generalizable representations from massive genomic data, thereby enabling their application across a spectrum of downstream applications. Despite…

Genomics · Quantitative Biology 2024-06-06 Zicheng Liu , Jiahui Li , Siyuan Li , Zelin Zang , Cheng Tan , Yufei Huang , Yajing Bai , Stan Z. Li

Sequence classification is an important data mining task in many real world applications. Over the past few decades, many sequence classification methods have been proposed from different aspects. In particular, the pattern-based method is…

Machine Learning · Computer Science 2020-12-15 Zengyou He , Guangyao Xu , Chaohua Sheng , Bo Xu , Quan Zou

Sequence classification algorithms, such as SVM, require a definition of distance (similarity) measure between two sequences. A commonly used notion of similarity is the number of matches between $k$-mers ($k$-length subsequences) in the…

Data Structures and Algorithms · Computer Science 2017-12-13 Muhammad Farhan , Juvaria Tariq , Arif Zaman , Mudassir Shabbir , Imdad Ullah Khan

Structure-from-motion (SfM) largely relies on feature tracking. In image sequences, if disjointed tracks caused by objects moving in and out of the field of view, occasional occlusion, or image noise, are not handled well, corresponding SfM…

Computer Vision and Pattern Recognition · Computer Science 2016-10-13 Guofeng Zhang , Haomin Liu , Zilong Dong , Jiaya Jia , Tien-Tsin Wong , Hujun Bao

A string matching -- and more generally, sequence matching -- algorithm is presented that has a linear worst-case computing time bound, a low worst-case bound on the number of comparisons (2n), and sublinear average-case behavior that is…

Data Structures and Algorithms · Computer Science 2008-10-02 David R. Musser , Gor V. Nishanov

Frequent pattern mining is widely used to find ``important'' or ``interesting'' patterns in data. While it is not easy to mathematically define such patterns, maximal frequent patterns are promising candidates, as frequency is a natural…

Data Structures and Algorithms · Computer Science 2025-04-08 Giovanni Buzzega , Alessio Conte , Yasuaki Kobayashi , Kazuhiro Kurita , Giulia Punzi

Deep neural networks have shown excellent performance in stereo matching task. Recently CNN-based methods have shown that stereo matching can be formulated as a supervised learning task. However, less attention is paid on the fusion of…

Computer Vision and Pattern Recognition · Computer Science 2019-06-26 Li Zhang , Quanhong Wang , Haihua Lu , Yong Zhao

This paper presents a novel framework for track fitting which is usable in a wide range of experiments, independent of the specific event topology, detector setup, or magnetic field arrangement. This goal is achieved through a completely…

High Energy Physics - Experiment · Physics 2014-11-20 C. Höppner , S. Neubert , B. Ketzer , S. Paul

A valuable step in the modeling of multiscale dynamical systems in fields such as computational chemistry, biology, materials science and more, is the representative sampling of the phase space over long timescales of interest; this task is…

Machine Learning · Computer Science 2023-12-29 Ellis R. Crabtree , Juan M. Bello-Rivas , Ioannis G. Kevrekidis

This paper adapts a popular image quality measure called structural similarity for high precision registration based tracking while also introducing a simpler and faster variant of the same. Further, these are evaluated comprehensively…

Computer Vision and Pattern Recognition · Computer Science 2017-01-31 Abhineet Singh , Mennatullah Siam , Martin Jagersand

Subgraph matching is a fundamental problem in graph analysis with a wide range of applications. However, due to its inherent NP-hardness, enumerating subgraph matches efficiently on large real-world graphs remains highly challenging. Most…

Databases · Computer Science 2026-03-11 Linglin Yang , Xunbin Su , Lei Zou , Xiangyang Gou , Yinnian Lin

Submodular functions are discrete analogs of convex functions, which have applications in various fields, including machine learning and computer vision. However, in large-scale applications, solving Submodular Function Minimization (SFM)…

Machine Learning · Statistics 2018-06-08 Weizhong Zhang , Bin Hong , Lin Ma , Wei Liu , Tong Zhang

metasnf is an R package that enables users to apply meta clustering, a method for efficiently searching a broad space of cluster solutions by clustering the solutions themselves, to clustering workflows based on similarity network fusion…

Dense retrieval has become the industry standard in large-scale information retrieval systems due to its high efficiency and competitive accuracy. Its core relies on a coarse-to-fine hierarchical architecture that enables rapid candidate…

Information Retrieval · Computer Science 2025-12-16 Huimu Wang , Yiming Qiu , Xingzhi Yao , Zhiguo Chen , Guoyu Tang , Songlin Wang , Sulong Xu , Mingming Li

Sequence comparison is a widely used computational technique in modern molecular biology. In spite of the frequent use of sequence comparisons the important problem of assigning statistical significance to a given degree of similarity is…

Quantitative Methods · Quantitative Biology 2007-05-23 Ralf Bundschuh , Nicholas Chia

Multi-modal entity alignment (MMEA) is essential for enhancing knowledge graphs and improving information retrieval and question-answering systems. Existing methods often focus on integrating modalities through their complementarity but…

Artificial Intelligence · Computer Science 2024-10-21 Wei Ai , Wen Deng , Hongyi Chen , Jiayi Du , Tao Meng , Yuntao Shou

In practical domains, high-dimensional data are usually associated with diverse semantic labels, whereas traditional feature selection methods are designed for single-label data. Moreover, existing multi-label methods encounter two main…

Machine Learning · Computer Science 2025-05-26 Yan Zhong , Xingyu Wu , Xinping Zhao , Li Zhang , Xinyuan Song , Lei Shi , Bingbing Jiang