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We study self-replicating molecules under externally varying conditions. Changing conditions such as temperature variations and/or alterations in the environment's resource composition lead to both non-constant replication and decay rates…

Biological Physics · Physics 2016-09-08 Claus O. Wilke , Christopher Ronnewinkel , Thomas Martinetz

The applicability of computational and dynamical systems models to organisms is scrutinized, using examples from developmental biology and cognition. Developmental morphogenesis is dependent on the inherent material properties of developing…

Neurons and Cognition · Quantitative Biology 2023-10-24 Stuart A. Newman

Investigating the behavior of noninteracting fermions subjected to local dephasing, we reveal that quasi-particle dephasing can induce superdiffusive transport. This superdiffusion arises from nodal points within the momentum distribution…

Statistical Mechanics · Physics 2023-12-18 Yu-Peng Wang , Chen Fang , Jie Ren

We study a coupled driven system in which two species of particles are advected by a fluctuating potential energy landscape. While the particles follow the potential gradient, each species affects the local shape of the landscape in…

Statistical Mechanics · Physics 2017-08-23 Shauri Chakraborty , Sakuntala Chatterjee , Mustansir Barma

We analyze a variant of the Desai-Zwanzig model [J. Stat. Phys. {\bf 19}1-24 (1978)]. In particular, we study stationary states of the mean field limit for a system of weakly interacting diffusions moving in a multi-well potential energy…

Statistical Mechanics · Physics 2019-03-13 Susana N. Gomes , Serafim Kalliadasis , Grigorios A. Pavliotis , Petr Yatsyshin

The appearance of so-called exceptional points in the complex spectra of non-Hermitian systems is often associated with phenomena that contradict our physical intuition. One example of particular interest is the state-exchange process…

The large deviation properties of equilibrium (reversible) lattice gases are mathematically reasonably well understood. Much less is known in non--equilibrium, namely for non reversible systems. In this paper we consider a simple example of…

Statistical Mechanics · Physics 2015-12-18 L. Bertini , A. De Sole , D. Gabrielli , G. Jona-Lasinio , C. Landim

A quasi-geostrophic intermediate complexity model is considered, providing a schematic representation of the baroclinic conversion processes which characterize the physics of the mid-latitudes atmospheric circulation. The model is relaxed…

Atmospheric and Oceanic Physics · Physics 2016-09-08 Valerio Lucarini , Antonio Speranza , Renato VItolo

In evolution theory the concept of a fitness landscape has played an important role, evolution itself being portrayed as a hill-climbing process on a rugged landscape. In this article it is shown that in general, in the presence of other…

Adaptation and Self-Organizing Systems · Physics 2016-11-17 C. R. Stephens

We introduce the notion of a quasistatic dynamical system, which generalizes that of an ordinary dynamical system. Quasistatic dynamical systems are inspired by the namesake processes in thermodynamics, which are idealized processes where…

Dynamical Systems · Mathematics 2016-05-18 Neil Dobbs , Mikko Stenlund

Stochastic systems often exhibit multiple viable metastable states that are long-lived. Over very long timescales, fluctuations may push the system to transition between them, drastically changing its macroscopic configuration. In realistic…

Statistical Mechanics · Physics 2023-04-14 Tobias Grafke , Alessandro Laio

Gravitational and electrostatic interactions are fundamental examples of systems with long-range interactions. Equilibrium properties of simple models with long-range interactions are well understood and exhibit exotic behaviors : negative…

Statistical Mechanics · Physics 2012-01-05 Pierre de Buyl

A new kind of cellular automaton (CA) for the study of the dynamics of urban systems is proposed. The state of a cell is not described using a finite set, but by means of continuum variables. A population sector is included, taking into…

Cellular Automata and Lattice Gases · Physics 2007-05-23 Alberto Vancheri , Paolo Giordano , Denise Andrey , Sergio Albeverio

We analyze the long-term stability of a stochastic model designed to illustrate the adaptation of a population to variation in its environment. A piecewise-deterministic process modeling adaptation is coupled to a Feller logistic diffusion…

Probability · Mathematics 2021-09-14 Aurélien Velleret

We present a possible definition of a mobility gap for a many-body quantum system, in analogy to definitions of dynamical localization for single particle systems. Using this definition, we construct "corrected" quasi-adiabatic continuation…

Mathematical Physics · Physics 2010-02-01 M. B. Hastings

Systems with a complex dynamics like glasses or models of biological evolution are often pictured in terms of complex landscapes, with a large number of possible collective states. We show on the example of a stochastic spin model with…

Disordered Systems and Neural Networks · Physics 2026-02-03 Laura Guislain , Eric Bertin

The quasi-species equation describes the evolution of the probability that a random individual in a population carries a given genome. Here we map the quasi-species equation for individuals of a self-reproducing population to an ensemble of…

Statistical Mechanics · Physics 2012-06-20 Ginestra Bianconi , Christoph Rahmede

Phyllotactic patterns possess the quasicrystalline structure of the quasiperiodic Penrose tiling pattern. The author has shown that quasicrystalline structure of the quasiperiodic Penrose tiling pattern underlie iterative growth processes…

chao-dyn · Physics 2007-05-23 A. Mary Selvam

The dynamics of a quantum system following a sudden, highly non-adiabatic change of its control parameter (quantum quench) is studied with quasiclassical techniques. Recent works have shown, using exact quantum mechanical approach, that…

In order to better understand the occurrence of phase transitions, we adopt an approach based on the study of energy landscapes: The relation between stationary points of the potential energy landscape of a classical many-particle system…

Statistical Mechanics · Physics 2009-03-24 Michael Kastner
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