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Discovering dominant patterns and exploring dynamic behaviors especially critical state transitions and tipping points in high-dimensional time-series data are challenging tasks in study of real-world complex systems, which demand…

Machine Learning · Statistics 2025-01-23 Pei Chen , Yaofang Suo , Rui Liu , Luonan Chen

While nowadays visual anomaly detection algorithms use deep neural networks to extract salient features from images, the high dimensionality of extracted features makes it difficult to apply those algorithms to large data with 1000s of…

Computer Vision and Pattern Recognition · Computer Science 2026-03-02 Teng-Yok Lee

We present a collection of algorithms which utilize dimensional reduction to perform mesh refinement and study possibly singular solutions of time-dependent partial differential equations. The algorithms are inspired by constructions used…

Numerical Analysis · Mathematics 2007-06-21 Panagiotis Stinis

Microarray techniques are widely used in Gene expression analysis. These techniques are based on discovering submatrices of genes that share similar expression patterns across a set of experimental conditions with coherence constraint.…

Quantitative Methods · Quantitative Biology 2020-01-27 Bilal Taher , Muhammad. H Fares , Saeed Jalili

Developing interpretable machine learning models has become an increasingly important issue. One way in which data scientists have been able to develop interpretable models has been to use dimension reduction techniques. In this paper, we…

Machine Learning · Computer Science 2023-03-23 Sean H. Merritt , Alexander P. Christensen

Random Projection (RP) technique has been widely applied in many scenarios because it can reduce high-dimensional features into low-dimensional space within short time and meet the need of real-time analysis of massive data. There is an…

Machine Learning · Computer Science 2017-06-20 Haozhe Xie , Jie Li , Qiaosheng Zhang , Yadong Wang

Dimension reduction is the process of embedding high-dimensional data into a lower dimensional space to facilitate its analysis. In the Euclidean setting, one fundamental technique for dimension reduction is to apply a random linear map to…

Probability · Mathematics 2017-09-19 Samet Oymak , Joel A. Tropp

Dimensional reduction techniques have long been used to visualize the structure and geometry of high dimensional data. However, most widely used techniques are difficult to interpret due to nonlinearities and opaque optimization processes.…

Quantitative Methods · Quantitative Biology 2024-01-09 Andrew Baumgartner , Sui Huang , Jennifer Hadlock , Cory Funk

Big data is transforming our world, revolutionizing operations and analytics everywhere, from financial engineering to biomedical sciences. The complexity of big data often makes dimension reduction techniques necessary before conducting…

Methodology · Statistics 2018-01-08 Jianqing Fan , Qiang Sun , Wen-Xin Zhou , Ziwei Zhu

Large scale dynamical systems (e.g. many nonlinear coupled differential equations) can often be summarized in terms of only a few state variables (a few equations), a trait that reduces complexity and facilitates exploration of behavioral…

Data-aware methods for dimensionality reduction and matrix decomposition aim to find low-dimensional structure in a collection of data. Classical approaches discover such structure by learning a basis that can efficiently express the…

Information Theory · Computer Science 2015-05-06 Eva L. Dyer , Tom A. Goldstein , Raajen Patel , Konrad P. Kording , Richard G. Baraniuk

Parallel coordinate plots (PCPs) are among the most useful techniques for the visualization and exploration of high-dimensional data spaces. They are especially useful for the representation of correlations among the dimensions, which…

Human-Computer Interaction · Computer Science 2016-09-20 Takayuki Itoh , Ashnil Kumar , Karsten Klein , Jinman Kim

For very large datasets, random projections (RP) have become the tool of choice for dimensionality reduction. This is due to the computational complexity of principal component analysis. However, the recent development of randomized…

Machine Learning · Statistics 2019-01-04 Michael Wojnowicz , Di Zhang , Glenn Chisholm , Xuan Zhao , Matt Wolff

Dimensionality reduction techniques are widely used for visualizing high-dimensional data. However, support for interpreting patterns of dimension reduction results in the context of the original data space is often insufficient.…

Human-Computer Interaction · Computer Science 2024-04-15 Brian Montambault , Gabriel Appleby , Jen Rogers , Camelia D. Brumar , Mingwei Li , Remco Chang

We present a tutorial on reduced-rank signal processing, design methods and algorithms for dimensionality reduction, and cover a number of important applications. A general framework based on linear algebra and linear estimation is employed…

Information Theory · Computer Science 2015-08-05 Rodrigo C. de Lamare

Mapping conformational heterogeneity of macromolecules presents a formidable challenge to X-ray crystallography and cryo-electron microscopy, which often presume its absence. This has severely limited our knowledge of the conformations…

Biological Physics · Physics 2015-05-14 P. Schwander , R. Fung , G. N. Phillips , A. Ourmazd

Interactive exploration of large, multidimensional datasets plays a very important role in various scientific fields. It makes it possible not only to identify important structural features and forms, such as clusters of vertices and their…

Machine Learning · Computer Science 2023-03-10 Bartosz Minch

In our work, we propose a novel formulation for supervised dimensionality reduction based on a nonlinear dependency criterion called Statistical Distance Correlation, Szekely et. al. (2007). We propose an objective which is free of…

Machine Learning · Computer Science 2016-01-05 Praneeth Vepakomma , Chetan Tonde , Ahmed Elgammal

The collection and visual analysis of large-scale data from complex systems, such as electronic health records or clickstream data, has become increasingly common across a wide range of industries. This type of retrospective visual…

Human-Computer Interaction · Computer Science 2020-12-07 David Borland , Jonathan Zhang , Smiti Kaul , David Gotz

The development and use of dimension reduction methods is prevalent in modern statistical literature. This paper reviews a class of dimension reduction techniques which aim to simultaneously select relevant predictors and find clusters…

Methodology · Statistics 2022-02-18 Suchit Mehrotra