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Related papers: Two phase picture in driven polymer translocation

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In this work we study the assisted translocation of a polymer across a membrane nanopore, inside which a molecular motor exerts a force fuelled by the hydrolysis of ATP molecules. In our model the motor switches to its active state for a…

Soft Condensed Matter · Physics 2018-03-26 A. Fiasconaro , J. J. Mazo , F. Falo

We propose a technique for robust optomechanical state transfer using phase-tailored composite pulse driving with constant amplitude. Our proposal is inspired by coherent control techniques in lossless driven qubits. We demonstrate that…

Quantum Physics · Physics 2019-03-15 C. Ventura-Velázquez , B. Jaramillo Ávila , E. Kyoseva , B. M. Rodríguez-Lara

Polymer-coated pores play a crucial role in nucleo-cytoplasmic transport and in a number of biomimetic and nanotechnological applications. Here we present Monte Carlo and Density Functional Theory approaches to identify different collective…

Soft Condensed Matter · Physics 2015-05-30 Dino Osmanovic , Joe Bailey , Anthony H. Harker , Ariberto Fassati , Bart W. Hoogenboom , Ian J. Ford

In this paper, we revisit asymptotic stability for the two-dimensional incompressible porous media equation and the Stokes transport system in a periodic channel. It is well-known that a stratified density, which strictly decreases in the…

Analysis of PDEs · Mathematics 2024-04-02 Jaemin Park

In this paper we introduce a new technique for depicting the phase portrait of stochastic differential equations. Following previous work for deterministic systems, we represent the phase space by means of a generalization of the method of…

Dynamical Systems · Mathematics 2017-06-01 Francisco Balibrea-Iniesta , Carlos Lopesino , Stephen Wiggins , Ana M. Mancho

We review the description and modeling of transport phenomena among the electron systems coupled via scalar or vector photons. It consists of three parts. The first part is about scalar photons, i.e., Coulomb interactions. The second part…

Mesoscale and Nanoscale Physics · Physics 2023-03-28 Jian-Sheng Wang , Jiebin Peng , Zu-Quan Zhang , Yong-Mei Zhang , Tao Zhu

We propose a model that describes phase transition including metastable phases present in the van der Waals Equation of State (EoS). We introduce a dynamical system that is able to depict the mass transfer between two phases, for which…

Numerical Analysis · Mathematics 2014-02-07 François James , Hélène Mathis

We propose a novel phase-field model to predict elastic microphase separation in polymer gels. To this end, we extend the Cahn-Hilliard free-energy functional to incorporate an elastic strain energy and a coupling term. These contributions…

Materials Science · Physics 2025-05-05 Hamza Oudich , Pietro Carrara , Laura De Lorenzis

A consistent and conservative Phase-Field method, including both the model and scheme, is developed for multiphase flows with an arbitrary number of immiscible and incompressible fluid phases. The consistency of mass conservation and the…

Computational Physics · Physics 2022-02-15 Ziyang Huang , Guang Lin , Arezoo M. Ardekani

It is demonstrated that the description of surface-diffusion controlled dynamics via the phase-field method is less trivial than it appears at first sight. A seemingly straightforward approach previously used in the literature is shown to…

Other Condensed Matter · Physics 2007-05-23 Klaus Kassner

In this work we use a three-dimensional Pauli master equation to investigate the charge carrier mobility of a two-phase system, which can mimic donor-acceptor and amorphous- crystalline bulk heterojunctions. Our approach can be separated…

The transport of energetic particles in a spatially varying magnetic field is described by the focused transport equation. In the past two versions of this equation were investigated. The more commonly used standard form described a…

Solar and Stellar Astrophysics · Physics 2025-09-11 B. Klippenstein , A. Shalchi

When driven by nonequilibrium fluctuations, particle systems may display phase transitions and physical behaviour with no equilibrium counterpart. We study a two-dimensional particle model initially proposed to describe driven non-Brownian…

Statistical Mechanics · Physics 2023-08-23 Leonardo Galliano , Michael E. Cates , Ludovic Berthier

Focusing on simulated dilute polymer solutions, this letter investigates the interactions between flow structures and organized polymer stress sheets for the steady arrowhead coherent structure in a two-dimensional periodic channel flow.…

Soft Condensed Matter · Physics 2026-02-24 Pierre-Yves Goffin , Yves Dubief , Vincent E. Terrapon

We apply the computational methodology of phase retrieval to the problem of folding heteropolymers. The ground state fold of the polymer is defined by the intersection of two sets in the configuration space of its constituent monomers: a…

Biomolecules · Quantitative Biology 2013-05-29 Veit Elser , Ivan Rankenburg

We consider a phase-field fracture propagation model, which consists of two (nonlinear) coupled partial differential equations. The first equation describes the displacement evolution, and the second is a smoothed indicator variable,…

Numerical Analysis · Mathematics 2019-12-17 Christian Engwer , Iuliu Sorin Pop , Thomas Wick

In toroidal geometry, and prior to the establishment of a fully developed turbulent state, the so-called topological instability of the pressure-gradient-driven turbulence is observed. In this intermediate state, a narrow spectral band of…

The steady sliding state of periodic structures such as charge density waves and flux line lattices is numerically studied based on two and three dimensional driven random field XY models. We focus on the dynamical phase transition between…

Disordered Systems and Neural Networks · Physics 2009-11-11 Tomoaki Nogawa , Hajime Yoshino , Hiroshi Matsukawa

We provide a Boltzmann-type kinetic description for dilute polymer solutions based on two-fluid theory. This Boltzmann-type description uses a quasi-equilibrium based relaxation mechanism to model collisions between a polymer dumbbell and a…

Computational Physics · Physics 2022-10-19 Shiwani Singh , Ganesh Subramanian , Santosh Ansumali

We consider the macroscopic transport properties of two-dimensional random binary mixtures with identical spatial distributions of the two phases. Previous studies have obtained exact analytical results for the electrical conductivity of a…

Mesoscale and Nanoscale Physics · Physics 2020-01-29 Oded Agam , Igor L Aleiner , Dror Orgad