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For many algorithmic problems, traditional algorithms that optimise on the number of instructions executed prove expensive on I/Os. Novel and very different design techniques, when applied to these problems, can produce algorithms that are…

Data Structures and Algorithms · Computer Science 2010-05-20 Alka

We present a shared-memory algorithm to compute high-quality solutions to the balanced $k$-way hypergraph partitioning problem. This problem asks for a partition of the vertex set into $k$ disjoint blocks of bounded size that minimizes the…

Data Structures and Algorithms · Computer Science 2021-04-19 Lars Gottesbüren , Tobias Heuer , Peter Sanders , Sebastian Schlag

We introduce the Multicolored Graph Realization problem (MGRP). The input to the problem is a colored graph $(G,\varphi)$, i.e., a graph together with a coloring on its vertices. We can associate to each colored graph a cluster graph…

Computational Complexity · Computer Science 2021-03-25 Josep Díaz , Öznur Yaşar Diner , Maria Serna , Oriol Serra

This paper investigates concurrency-constrained scheduling problems, where the objective is to construct a schedule for a set of jobs subject to concurrency restrictions. Formally, we are given a conflict graph $G$ defined over a set of $n$…

Discrete Mathematics · Computer Science 2025-06-30 Hans L. Bodlaender , Danny Hermelin , Erik Jan van Leeuwen

In the Colored Clustering problem, one is asked to cluster edge-colored (hyper-)graphs whose colors represent interaction types. More specifically, the goal is to select as many edges as possible without choosing two edges that share an…

Data Structures and Algorithms · Computer Science 2023-02-02 Leon Kellerhals , Tomohiro Koana , Pascal Kunz , Rolf Niedermeier

We study the behavior of the Douglas-Rachford algorithm on the graph vertex-coloring problem. Given a graph and a number of colors, the goal is to find a coloring of the vertices so that all adjacent vertex pairs have different colors. In…

Optimization and Control · Mathematics 2018-08-06 F. J. Aragón Artacho , R. Campoy , V. Elser

Graph matching is a challenging problem with very important applications in a wide range of fields, from image and video analysis to biological and biomedical problems. We propose a robust graph matching algorithm inspired in…

Optimization and Control · Mathematics 2013-11-26 Marcelo Fiori , Pablo Sprechmann , Joshua Vogelstein , Pablo Musé , Guillermo Sapiro

Graph colouring is a fundamental problem for networks, serving as a tool for avoiding conflicts via symmetry breaking, for example, avoiding multiple computer processes simultaneously updating the same resource. This paper considers a…

Data Structures and Algorithms · Computer Science 2025-11-26 Duncan Adamson , George B. Mertzios , Paul G. Spirakis

This chapter studies the problem of traversing large graphs using the breadth-first search order on distributed-memory supercomputers. We consider both the traditional level-synchronous top-down algorithm as well as the recently discovered…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-05-15 Aydin Buluc , Scott Beamer , Kamesh Madduri , Krste Asanovic , David Patterson

Understanding genetic variation, e.g., through mutations, in organisms is crucial to unravel their effects on the environment and human health. A fundamental characterization can be obtained by solving the haplotype assembly problem, which…

Genomics · Quantitative Biology 2022-10-25 Hansheng Xue , Vaibhav Rajan , Yu Lin

Graph similarity computation aims to predict a similarity score between one pair of graphs to facilitate downstream applications, such as finding the most similar chemical compounds similar to a query compound or Fewshot 3D Action…

Machine Learning · Computer Science 2021-01-06 Haoyan Xu , Ziheng Duan , Jie Feng , Runjian Chen , Qianru Zhang , Zhongbin Xu , Yueyang Wang

We present a novel neural architecture to solve graph optimization problems where the solution consists of arbitrary node labels, allowing us to solve hard problems like graph coloring. We train our model using reinforcement learning,…

Machine Learning · Computer Science 2022-05-11 Lukas Gianinazzi , Maximilian Fries , Nikoli Dryden , Tal Ben-Nun , Maciej Besta , Torsten Hoefler

Matrix Factorization (MF) has been widely applied in machine learning and data mining. A large number of algorithms have been studied to factorize matrices. Among them, stochastic gradient descent (SGD) is a commonly used method.…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-30 Yuanhang Yu , Dong Wen , Ying Zhang , Xiaoyang Wang , Wenjie Zhang , Xuemin Lin

Coloring is used in wireless networks to improve communication efficiency, mainly in terms of bandwidth, energy and possibly end-to-end delays. In this research report, we define the h-hop node coloring problem, with h any positive integer.…

Networking and Internet Architecture · Computer Science 2011-04-12 Ichrak Amdouni , Pascale Minet , Cédric Adjih

In this paper we consider the problem of identifying intersections between two sets of d-dimensional axis-parallel rectangles. This is a common problem that arises in many agent-based simulation studies, and is of central importance in the…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-08-08 Moreno Marzolla , Gabriele D'Angelo

Many complex systems and datasets are characterized by multiway interactions of different categories, and can be modeled as edge-colored hypergraphs. We focus on clustering such datasets using the NP-hard edge-colored clustering problem,…

Data Structures and Algorithms · Computer Science 2026-03-04 Seongjune Han , Nate Veldt

The most commonly used method to tackle the graph partitioning problem in practice is the multilevel approach. During a coarsening phase, a multilevel graph partitioning algorithm reduces the graph size by iteratively contracting nodes and…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-03-26 Henning Meyerhenke , Peter Sanders , Christian Schulz

The graph partitioning problem is a well-known NP-hard problem. In this paper, we formulate a 0-1 quadratic integer programming model for the graph partitioning problem with vertex weight constraints and fixed vertex constraints, and…

Optimization and Control · Mathematics 2025-03-17 Wumwi Sun , Hongwei Liu , Xiaoyu Wang

With the increasing number of new neural architecture designs and substantial existing neural architectures, it becomes difficult for the researchers to situate their contributions compared with existing neural architectures or establish…

Artificial Intelligence · Computer Science 2024-03-19 Xiaohuan Pei , Yanxi Li , Minjing Dong , Chang Xu

In this paper we present matrix game-theoretic models for joint routing, network coding, and scheduling problem. First routing and network coding are modeled by using a new approach based on compressed topology matrix that takes into…

Signal Processing · Electrical Eng. & Systems 2018-03-14 Ebrahim Karami , Savo Glisic
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