Related papers: Efficient Parallel Computation of Nearest Neighbor…
The Fr\'echet distance is a commonly used similarity measure between curves. It is known how to compute the continuous Fr\'echet distance between two polylines with $m$ and $n$ vertices in $\mathbb{R}^d$ in $O(mn (\log \log n)^2)$ time;…
Computing fixed-radius near-neighbor graphs is an important first step for many data analysis algorithms. Near-neighbor graphs connect points that are close under some metric, endowing point clouds with a combinatorial structure. As…
In this short paper, we present an improved algorithm for approximating the minimum cut on distributed (CONGEST) networks. Let $\lambda$ be the minimum cut. Our algorithm can compute $\lambda$ exactly in…
Given an $n$-vertex non-negatively real-weighted graph $G$, whose vertices are partitioned into a set of $k$ clusters, a \emph{clustered network design problem} on $G$ consists of solving a given network design optimization problem on $G$,…
Consider a forest that evolves via $link$ operations that make the root of one tree the child of a node in another tree. Intermixed with $link$ operations are $nca$ operations, which return the nearest common ancestor of two given nodes…
Neighborhood graphs are gaining popularity as a concise data representation in machine learning. However, naive graph construction by pairwise distance calculation takes $O(n^2)$ runtime for $n$ data points and this is prohibitively slow…
This paper shows the weighted matching problem on general graphs can be solved in time $O(n(m + n\log n))$ for $n$ and $m$ the number of vertices and edges, respectively. This was previously known only for bipartite graphs. The crux is a…
The distance transform algorithm is popular in computer vision and machine learning domains. It is used to minimize quadratic functions over a grid of points. Felzenszwalb and Huttenlocher (2004) describe an O(N) algorithm for computing the…
We give an $\tilde O(n^2)$ time algorithm for computing the exact Dynamic Time Warping distance between two strings whose run-length encoding is of size at most $n$. This matches (up to log factors) the known (conditional) lower bound, and…
We describe an algorithm that takes as input n points in the plane and a parameter {\epsilon}, and produces as output an embedded planar graph having the given points as a subset of its vertices in which the graph distances are a (1 +…
We study the $c$-approximate near neighbor problem under the continuous Fr\'echet distance: Given a set of $n$ polygonal curves with $m$ vertices, a radius $\delta > 0$, and a parameter $k \leq m$, we want to preprocess the curves into a…
Random graph matching refers to recovering the underlying vertex correspondence between two random graphs with correlated edges; a prominent example is when the two random graphs are given by Erd\H{o}s-R\'{e}nyi graphs $G(n,\frac{d}{n})$.…
In evolutionary biology, phylogenetic networks are now widely used to represent the historical relationships between species and population, when this history includes reticulation events such as hybridization, gene flow and admixture…
We prove the following result about approximating the maximum independent set in a graph. Informally, we show that any approximation algorithm with a ``non-trivial'' approximation ratio (as a function of the number of vertices of the input…
In distance query reconstruction, we wish to reconstruct the edge set of a hidden graph by asking as few distance queries as possible to an oracle. Given two vertices $u$ and $v$, the oracle returns the shortest path distance between $u$…
Graph Neural Networks (GNNs) have recently emerged as a promising approach to tackling power allocation problems in wireless networks. Since unpaired transmitters and receivers are often spatially distant, the distance-based threshold is…
We present a set of parallel algorithms for computing exact k-nearest neighbors in low dimensions. Many k-nearest neighbor algorithms use either a kd-tree or the Morton ordering of the point set; our algorithms combine these approaches…
The rooted subtree prune and regraft (rSPR) distance between two rooted binary phylogenetic trees is a well-studied measure of topological dissimilarity that is NP-hard to compute. Here we describe an improved linear kernel for the problem.…
Computing the quadratic transportation metric (also called the $2$-Wasserstein distance or root mean square distance) between two point clouds, or, more generally, two discrete distributions, is a fundamental problem in machine learning,…
Nearest neighbor search under elastic distances is a key tool for time series analysis, supporting many applications. However, straightforward implementations of distances require $O(n^2)$ space and time complexities, preventing these…