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This paper proposes an efficient data structure, ikd-Tree, for dynamic space partition. The ikd-Tree incrementally updates a k-d tree with new coming points only, leading to much lower computation time than existing static k-d trees.…

Robotics · Computer Science 2021-02-23 Yixi Cai , Wei Xu , Fu Zhang

Data intensive applications on clusters often require requests quickly be sent to the node managing the desired data. In many applications, one must look through a sorted tree structure to determine the responsible node for accessing or…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-05-23 Xiaoqin Ma , Gene Cooperman

This paper proposes FREEtree, a tree-based method for high dimensional longitudinal data with correlated features. Popular machine learning approaches, like Random Forests, commonly used for variable selection do not perform well when there…

Machine Learning · Statistics 2020-06-18 Yuancheng Xu , Athanasse Zafirov , R. Michael Alvarez , Dan Kojis , Min Tan , Christina M. Ramirez

Indexes are models: a B-Tree-Index can be seen as a model to map a key to the position of a record within a sorted array, a Hash-Index as a model to map a key to a position of a record within an unsorted array, and a BitMap-Index as a model…

Databases · Computer Science 2018-05-01 Tim Kraska , Alex Beutel , Ed H. Chi , Jeffrey Dean , Neoklis Polyzotis

We introduce a new, practical method for conducting an exact search in a uni- and bidirectional FM index in $O(1)$ time per step while using $O(\log \sigma * n) + o(\log \sigma * \sigma * n)$ bits of space. This is done by replacing the…

Data Structures and Algorithms · Computer Science 2016-11-18 Christopher Pockrandt , Marcel Ehrhardt , Knut Reinert

Timely maintenance is an important means of increasing system dependability and life span. Fault Maintenance trees (FMTs) are an innovative framework incorporating both maintenance strategies and degradation models and serve as a good…

Systems and Control · Computer Science 2018-06-25 Nathalie Cauchi , Khaza Anuarul Hoque , Marielle Stoelinga , Alessandro Abate

Byte-addressable persistent memory (PM) brings hash tables the potential of low latency, cheap persistence and instant recovery. The recent advent of Intel Optane DC Persistent Memory Modules (DCPMM) further accelerates this trend. Many new…

Databases · Computer Science 2020-10-30 Baotong Lu , Xiangpeng Hao , Tianzheng Wang , Eric Lo

This paper focuses on parallel hash functions based on tree modes of operation for an inner Variable-Input-Length function. This inner function can be either a single-block-length (SBL) and prefix-free MD hash function, or a sponge-based…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-06-13 Kevin Atighehchi , Robert Rolland

Because of their superior ability to preserve sequence information over time, Long Short-Term Memory (LSTM) networks, a type of recurrent neural network with a more complex computational unit, have obtained strong results on a variety of…

Computation and Language · Computer Science 2015-06-02 Kai Sheng Tai , Richard Socher , Christopher D. Manning

Monte Carlo Tree Search (MCTS) methods have achieved great success in many Artificial Intelligence (AI) benchmarks. The in-tree operations become a critical performance bottleneck in realizing parallel MCTS on CPUs. In this work, we develop…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-08-25 Yuan Meng , Rajgopal Kannan , Viktor Prasanna

Tree-based models have proven to be an effective solution for web ranking as well as other problems in diverse domains. This paper focuses on optimizing the runtime performance of applying such models to make predictions, given an…

Databases · Computer Science 2013-04-29 Nima Asadi , Jimmy Lin , Arjen P. de Vries

Suffix trees are a fundamental data structure in stringology, but their space usage, though linear, is an important problem for its applications. We design and implement a new compressed suffix tree targeted to highly repetitive texts, such…

Data Structures and Algorithms · Computer Science 2019-02-12 Manuel Cáceres , Gonzalo Navarro

Modern key-value stores rely heavily on Log-Structured Merge (LSM) trees for write optimization, but this design introduces significant read amplification. Auxiliary structures like Bloom filters help, but impose memory costs that scale…

Data Structures and Algorithms · Computer Science 2025-08-05 Nicholas Fidalgo , Puyuan Ye

The paper presents the first \emph{concurrency-optimal} implementation of a binary search tree (BST). The implementation, based on a standard sequential implementation of an internal tree, ensures that every \emph{schedule} is accepted,…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-03-03 Vitaly Aksenov , Vincent Gramoli , Petr Kuznetsov , Anna Malova , Srivatsan Ravi

Recently, flash memories have become a competitive solution for mass storage. The flash memories have rather different properties compared with the rotary hard drives. That is, the writing of flash memories is constrained, and flash…

Information Theory · Computer Science 2016-11-17 Xudong Ma

As data volumes continue to grow rapidly, traditional search algorithms, like the red-black tree and B+ Tree, face increasing challenges in performance, especially in big data scenarios with intensive storage access. This paper presents the…

Databases · Computer Science 2025-04-02 Songpeng Liu

Self-adjusting data structures are a classic approach to adapting the complexity of operations to the data access distribution. While several self-adjusting variants are known for both binary search trees and B-Trees, existing constructions…

Data Structures and Algorithms · Computer Science 2023-10-10 Alexander Slastin , Dan Alistarh , Vitaly Aksenov

Merkle hash trees are the standard method to protect the integrity and freshness of stored data. However, hash trees introduce additional compute and I/O costs on the I/O critical path, and prior efforts have not fully characterized these…

Cryptography and Security · Computer Science 2025-01-30 Quinn Burke , Ryan Sheatsley , Rachel King , Owen Hines , Michael Swift , Patrick McDaniel

Suffix trees have emerged to be very fast for pattern searching yielding O (m) time, where m is the pattern size. Unfortunately their high memory requirements make it impractical to work with huge amounts of data. We present a memory…

Data Structures and Algorithms · Computer Science 2017-03-08 Freeson Kaniwa , Venu Madhav Kuthadi , Otlhapile Dinakenyane , Heiko Schroeder

A classic versioned data structure in storage and computer science is the copy-on-write (CoW) B-tree -- it underlies many of today's file systems and databases, including WAFL, ZFS, Btrfs and more. Unfortunately, it doesn't inherit the…

Data Structures and Algorithms · Computer Science 2015-03-19 Andy Twigg , Andrew Byde , Grzegorz Milos , Tim Moreton , John Wilkes , Tom Wilkie
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